Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU109845 |
| length | 250 |
| lncRNA type | inter_gene |
| GC content | 0.29 |
| exon number | 3 |
| gene id | G92421 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 1336891 ~ 1341381 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU109792 | lncRNA | downstream | 40993 | 1288701 ~ 1295898 (-) | True | G92412 |
| TU109581 | lncRNA | downstream | 44398 | 1197159 ~ 1292493 (-) | False | bloc1s6 |
| TU109649 | lncRNA | downstream | 120454 | 1149539 ~ 1216437 (-) | True | G92294 |
| TU109728 | lncRNA | downstream | 320709 | 1014447 ~ 1016182 (-) | True | G92359 |
| TU109711 | lncRNA | downstream | 352370 | 982501 ~ 984521 (-) | True | G92343 |
| TU109831 | lncRNA | upstream | 3169 | 1344550 ~ 1344828 (-) | True | G92415 |
| TU109827 | lncRNA | upstream | 9825 | 1351206 ~ 1354977 (-) | True | G92413 |
| TU109888 | lncRNA | upstream | 70312 | 1411693 ~ 1413647 (-) | True | G92459 |
| TU109894 | lncRNA | upstream | 74701 | 1416082 ~ 1416504 (-) | True | G92463 |
| TU109928 | lncRNA | upstream | 150913 | 1492294 ~ 1510364 (-) | True | G92488 |
| XM_034305172.1 | mRNA | downstream | 22236 | 1294052 ~ 1314655 (-) | False | LOC113526639 |
| XM_034305171.1 | mRNA | downstream | 22236 | 1294052 ~ 1314655 (-) | True | LOC113526639 |
| XM_034305319.1 | mRNA | downstream | 102265 | 1227607 ~ 1234626 (-) | True | spata5l1 |
| XM_034305524.1 | mRNA | downstream | 110540 | 1222902 ~ 1226351 (-) | False | c6h15orf48 |
| XM_034305211.1 | mRNA | downstream | 135168 | 1197135 ~ 1201723 (-) | True | bloc1s6 |
| XM_026911983.2 | mRNA | upstream | 121362 | 1462743 ~ 1469671 (-) | True | dut |
| XM_026911985.2 | mRNA | upstream | 121362 | 1462743 ~ 1469259 (-) | False | dut |
| XM_026911984.2 | mRNA | upstream | 121362 | 1462743 ~ 1469223 (-) | False | dut |
| XM_034305386.1 | mRNA | upstream | 137547 | 1478928 ~ 1492027 (-) | True | LOC113525461 |
| XM_034305387.1 | mRNA | upstream | 174423 | 1515804 ~ 1531051 (-) | True | LOC113525562 |
| TU109770 | other | downstream | 110589 | 1222721 ~ 1226302 (-) | True | c6h15orf48 |
| TU109708 | other | downstream | 347835 | 982067 ~ 989056 (-) | True | G92340 |
| TU109707 | other | downstream | 347835 | 983467 ~ 989056 (-) | False | G92340 |
| XR_003402800.2 | other | downstream | 489956 | 836494 ~ 846935 (-) | False | slc27a2a |
| TU109528 | other | downstream | 589361 | 707760 ~ 747530 (-) | False | G92240 |
| TU109955 | other | upstream | 174357 | 1515738 ~ 1531062 (-) | False | LOC113525562 |
| TU109967 | other | upstream | 286420 | 1627801 ~ 1644217 (-) | False | sema6dl |
| TU109968 | other | upstream | 287248 | 1628629 ~ 1648286 (-) | False | sema6dl |
| TU109993 | other | upstream | 427024 | 1768405 ~ 1768795 (-) | True | G92531 |
| TU110620 | other | upstream | 1408007 | 2749388 ~ 2751169 (-) | True | G93046 |
