Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU109928 |
| length | 284 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G92488 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 1492294 ~ 1510364 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU109894 | lncRNA | downstream | 75790 | 1416082 ~ 1416504 (-) | True | G92463 |
| TU109888 | lncRNA | downstream | 78647 | 1411693 ~ 1413647 (-) | True | G92459 |
| TU109827 | lncRNA | downstream | 137317 | 1351206 ~ 1354977 (-) | True | G92413 |
| TU109831 | lncRNA | downstream | 147466 | 1344550 ~ 1344828 (-) | True | G92415 |
| TU109846 | lncRNA | downstream | 150913 | 1339890 ~ 1341381 (-) | False | G92421 |
| TU109956 | lncRNA | upstream | 25453 | 1535817 ~ 1632709 (-) | True | G92496 |
| XR_004578312.1 | lncRNA | upstream | 28666 | 1539030 ~ 1541212 (-) | True | LOC117597535 |
| TU109941 | lncRNA | upstream | 34168 | 1544532 ~ 1551386 (-) | False | G92491 |
| TU109947 | lncRNA | upstream | 34168 | 1544532 ~ 1559181 (-) | True | G92491 |
| TU109945 | lncRNA | upstream | 46259 | 1556623 ~ 1559181 (-) | False | G92491 |
| XM_034305386.1 | mRNA | downstream | 267 | 1478928 ~ 1492027 (-) | True | LOC113525461 |
| XM_026911983.2 | mRNA | downstream | 22623 | 1462743 ~ 1469671 (-) | True | dut |
| XM_026911985.2 | mRNA | downstream | 23035 | 1462743 ~ 1469259 (-) | False | dut |
| XM_026911984.2 | mRNA | downstream | 23071 | 1462743 ~ 1469223 (-) | False | dut |
| XM_034305172.1 | mRNA | downstream | 177639 | 1294052 ~ 1314655 (-) | False | LOC113526639 |
| XM_034305387.1 | mRNA | upstream | 5440 | 1515804 ~ 1531051 (-) | True | LOC113525562 |
| XM_034305436.1 | mRNA | upstream | 56207 | 1566571 ~ 1586370 (-) | True | slc24a5 |
| XM_034305322.1 | mRNA | upstream | 101447 | 1611811 ~ 1643871 (-) | True | sema6dl |
| XM_026926963.2 | mRNA | upstream | 354219 | 1864583 ~ 1876045 (-) | True | bcl2l10 |
| XM_026926964.2 | mRNA | upstream | 354219 | 1864583 ~ 1874623 (-) | False | bcl2l10 |
| TU109770 | other | downstream | 265992 | 1222721 ~ 1226302 (-) | True | c6h15orf48 |
| TU109708 | other | downstream | 503238 | 982067 ~ 989056 (-) | True | G92340 |
| TU109707 | other | downstream | 503238 | 983467 ~ 989056 (-) | False | G92340 |
| XR_003402800.2 | other | downstream | 645359 | 836494 ~ 846935 (-) | False | slc27a2a |
| TU109528 | other | downstream | 744764 | 707760 ~ 747530 (-) | False | G92240 |
| TU109955 | other | upstream | 5374 | 1515738 ~ 1531062 (-) | False | LOC113525562 |
| TU109967 | other | upstream | 117437 | 1627801 ~ 1644217 (-) | False | sema6dl |
| TU109968 | other | upstream | 118265 | 1628629 ~ 1648286 (-) | False | sema6dl |
| TU109993 | other | upstream | 258041 | 1768405 ~ 1768795 (-) | True | G92531 |
| TU110620 | other | upstream | 1239024 | 2749388 ~ 2751169 (-) | True | G93046 |
