Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU109945 |
| length | 1162 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 6 |
| gene id | G92491 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 1544532 ~ 1559181 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU109941 | lncRNA | downstream | 5237 | 1544532 ~ 1551386 (-) | False | G92491 |
| XR_004578312.1 | lncRNA | downstream | 15411 | 1539030 ~ 1541212 (-) | True | LOC117597535 |
| TU109928 | lncRNA | downstream | 46259 | 1492294 ~ 1510364 (-) | True | G92488 |
| TU109894 | lncRNA | downstream | 140119 | 1416082 ~ 1416504 (-) | True | G92463 |
| TU109888 | lncRNA | downstream | 142976 | 1411693 ~ 1413647 (-) | True | G92459 |
| TU109931 | lncRNA | upstream | 5899 | 1565080 ~ 1566502 (-) | True | G92489 |
| TU109962 | lncRNA | upstream | 37993 | 1597174 ~ 1648953 (-) | True | G92501 |
| TU109954 | lncRNA | upstream | 59435 | 1618616 ~ 1619113 (-) | True | G92494 |
| TU109966 | lncRNA | upstream | 65012 | 1624193 ~ 1624519 (-) | True | G92505 |
| TU109972 | lncRNA | upstream | 81508 | 1640689 ~ 1642945 (-) | True | G92510 |
| XM_034305387.1 | mRNA | downstream | 25572 | 1515804 ~ 1531051 (-) | True | LOC113525562 |
| XM_034305386.1 | mRNA | downstream | 64596 | 1478928 ~ 1492027 (-) | True | LOC113525461 |
| XM_026911983.2 | mRNA | downstream | 86952 | 1462743 ~ 1469671 (-) | True | dut |
| XM_034305436.1 | mRNA | upstream | 7390 | 1566571 ~ 1586370 (-) | True | slc24a5 |
| XM_034305322.1 | mRNA | upstream | 52630 | 1611811 ~ 1643871 (-) | True | sema6dl |
| XM_026926963.2 | mRNA | upstream | 305402 | 1864583 ~ 1876045 (-) | True | bcl2l10 |
| XM_026926964.2 | mRNA | upstream | 305402 | 1864583 ~ 1874623 (-) | False | bcl2l10 |
| XM_034305329.1 | mRNA | upstream | 322650 | 1881831 ~ 1904411 (-) | True | gnb5b |
| TU109955 | other | downstream | 25561 | 1515738 ~ 1531062 (-) | False | LOC113525562 |
| TU109770 | other | downstream | 330321 | 1222721 ~ 1226302 (-) | True | c6h15orf48 |
| TU109708 | other | downstream | 567567 | 982067 ~ 989056 (-) | True | G92340 |
| TU109707 | other | downstream | 567567 | 983467 ~ 989056 (-) | False | G92340 |
| XR_003402800.2 | other | downstream | 709688 | 836494 ~ 846935 (-) | False | slc27a2a |
| TU109967 | other | upstream | 68620 | 1627801 ~ 1644217 (-) | False | sema6dl |
| TU109968 | other | upstream | 69448 | 1628629 ~ 1648286 (-) | False | sema6dl |
| TU109993 | other | upstream | 209224 | 1768405 ~ 1768795 (-) | True | G92531 |
| TU110620 | other | upstream | 1190207 | 2749388 ~ 2751169 (-) | True | G93046 |
| TU110621 | other | upstream | 1200431 | 2759612 ~ 2768298 (-) | True | G93047 |
