Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU109966 |
| length | 235 |
| lncRNA type | intronic |
| GC content | 0.34 |
| exon number | 2 |
| gene id | G92505 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 1624193 ~ 1624519 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU109954 | lncRNA | downstream | 5080 | 1618616 ~ 1619113 (-) | True | G92494 |
| TU109931 | lncRNA | downstream | 57691 | 1565080 ~ 1566502 (-) | True | G92489 |
| TU109947 | lncRNA | downstream | 65012 | 1544532 ~ 1559181 (-) | True | G92491 |
| TU109945 | lncRNA | downstream | 65012 | 1556623 ~ 1559181 (-) | False | G92491 |
| TU109941 | lncRNA | downstream | 72807 | 1544532 ~ 1551386 (-) | False | G92491 |
| TU109972 | lncRNA | upstream | 16170 | 1640689 ~ 1642945 (-) | True | G92510 |
| TU109974 | lncRNA | upstream | 36923 | 1661442 ~ 1661843 (-) | True | G92512 |
| TU109987 | lncRNA | upstream | 71660 | 1696179 ~ 1696444 (-) | True | G92525 |
| TU110013 | lncRNA | upstream | 179059 | 1803578 ~ 1803803 (-) | True | G92540 |
| TU110041 | lncRNA | upstream | 215740 | 1840259 ~ 1841222 (-) | True | G92560 |
| XM_034305436.1 | mRNA | downstream | 37823 | 1566571 ~ 1586370 (-) | True | slc24a5 |
| XM_034305387.1 | mRNA | downstream | 93142 | 1515804 ~ 1531051 (-) | True | LOC113525562 |
| XM_034305386.1 | mRNA | downstream | 132166 | 1478928 ~ 1492027 (-) | True | LOC113525461 |
| XM_026911985.2 | mRNA | downstream | 154934 | 1462743 ~ 1469259 (-) | False | dut |
| XM_026926963.2 | mRNA | upstream | 240064 | 1864583 ~ 1876045 (-) | True | bcl2l10 |
| XM_026926964.2 | mRNA | upstream | 240064 | 1864583 ~ 1874623 (-) | False | bcl2l10 |
| XM_034305329.1 | mRNA | upstream | 257312 | 1881831 ~ 1904411 (-) | True | gnb5b |
| XM_034305210.1 | mRNA | upstream | 281999 | 1906518 ~ 1984333 (-) | True | myo5aa |
| XM_026926935.2 | mRNA | upstream | 362854 | 1987373 ~ 1992487 (-) | True | arpp19a |
| TU109955 | other | downstream | 93131 | 1515738 ~ 1531062 (-) | False | LOC113525562 |
| TU109770 | other | downstream | 397891 | 1222721 ~ 1226302 (-) | True | c6h15orf48 |
| TU109708 | other | downstream | 635137 | 982067 ~ 989056 (-) | True | G92340 |
| TU109707 | other | downstream | 635137 | 983467 ~ 989056 (-) | False | G92340 |
| XR_003402800.2 | other | downstream | 777258 | 836494 ~ 846935 (-) | False | slc27a2a |
| TU109967 | other | upstream | 3282 | 1627801 ~ 1644217 (-) | False | sema6dl |
| TU109968 | other | upstream | 4110 | 1628629 ~ 1648286 (-) | False | sema6dl |
| TU109993 | other | upstream | 143886 | 1768405 ~ 1768795 (-) | True | G92531 |
| TU110620 | other | upstream | 1124869 | 2749388 ~ 2751169 (-) | True | G93046 |
| TU110621 | other | upstream | 1135093 | 2759612 ~ 2768298 (-) | True | G93047 |
