Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU110967 |
| length | 207 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G93353 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 3215259 ~ 3215465 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU110964 | lncRNA | downstream | 3136 | 3211868 ~ 3212123 (-) | True | G93350 |
| TU110963 | lncRNA | downstream | 3455 | 3211591 ~ 3211804 (-) | True | G93349 |
| TU110956 | lncRNA | downstream | 14558 | 3199386 ~ 3200701 (-) | True | G93342 |
| TU110833 | lncRNA | downstream | 120320 | 3094708 ~ 3094939 (-) | True | G93231 |
| XR_003403502.2 | lncRNA | downstream | 296437 | 2906327 ~ 2918822 (-) | True | LOC113534492 |
| TU110952 | lncRNA | upstream | 11804 | 3227269 ~ 3235652 (-) | True | G93339 |
| TU110953 | lncRNA | upstream | 15485 | 3230950 ~ 3235652 (-) | False | G93339 |
| TU111001 | lncRNA | upstream | 151256 | 3366721 ~ 3367195 (-) | True | G93380 |
| XR_004578300.1 | lncRNA | upstream | 190680 | 3406145 ~ 3422158 (-) | True | LOC117597513 |
| TU111130 | lncRNA | upstream | 209558 | 3425023 ~ 3454371 (-) | True | G93505 |
| XM_026927191.2 | mRNA | downstream | 85870 | 3123317 ~ 3129389 (-) | True | ptx3a |
| XM_026926991.2 | mRNA | downstream | 146958 | 3064670 ~ 3068301 (-) | True | LOC113534302 |
| XM_026927419.2 | mRNA | downstream | 153764 | 3056704 ~ 3061495 (-) | True | LOC113534536 |
| XM_026927431.2 | mRNA | downstream | 162064 | 3048260 ~ 3053195 (-) | True | LOC113534544 |
| XM_034305155.1 | mRNA | downstream | 354300 | 2799623 ~ 2860959 (-) | True | pepd |
| XM_034305331.1 | mRNA | upstream | 27745 | 3243210 ~ 3291236 (-) | True | lekr1 |
| XM_026927330.2 | mRNA | upstream | 151936 | 3367401 ~ 3398528 (-) | False | tiparp |
| XM_034305276.1 | mRNA | upstream | 151936 | 3367401 ~ 3398091 (-) | True | tiparp |
| XM_034305556.1 | mRNA | upstream | 210253 | 3425718 ~ 3548751 (-) | False | kcnab1a |
| XM_034305553.1 | mRNA | upstream | 210253 | 3425718 ~ 3531691 (-) | False | kcnab1a |
| TU110621 | other | downstream | 446961 | 2759612 ~ 2768298 (-) | True | G93047 |
| TU110620 | other | downstream | 464090 | 2749388 ~ 2751169 (-) | True | G93046 |
| TU109993 | other | downstream | 1446464 | 1768405 ~ 1768795 (-) | True | G92531 |
| TU109968 | other | downstream | 1566973 | 1628629 ~ 1648286 (-) | False | sema6dl |
| TU109967 | other | downstream | 1571042 | 1627801 ~ 1644217 (-) | False | sema6dl |
| XR_004578380.1 | other | upstream | 213563 | 3429028 ~ 3531691 (-) | False | kcnab1a |
| TU111361 | other | upstream | 957823 | 4173288 ~ 4173594 (-) | True | G93711 |
| XR_004578382.1 | other | upstream | 1277081 | 4492546 ~ 4492739 (-) | True | LOC117597618 |
| trnam-cau_19 | other | upstream | 2978610 | 6194075 ~ 6194147 (-) | True | trnam-cau_19 |
| trnap-agg | other | upstream | 3649803 | 6865268 ~ 6865339 (-) | True | trnap-agg |
