Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU111341 |
| length | 222 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 2 |
| gene id | LOC117597611 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 4070800 ~ 4073533 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578346.1 | lncRNA | downstream | 126839 | 3944987 ~ 3946376 (-) | False | LOC113534402 |
| XR_004578345.1 | lncRNA | downstream | 126839 | 3944987 ~ 3946376 (-) | True | LOC113534402 |
| TU111281 | lncRNA | downstream | 337823 | 3735097 ~ 3735392 (-) | True | G93639 |
| TU111190 | lncRNA | downstream | 492009 | 3579017 ~ 3581206 (-) | True | G93557 |
| TU111130 | lncRNA | downstream | 618844 | 3425023 ~ 3454371 (-) | True | G93505 |
| TU111357 | lncRNA | upstream | 81724 | 4155257 ~ 4155497 (-) | True | G93707 |
| TU111360 | lncRNA | upstream | 98540 | 4172073 ~ 4172312 (-) | True | G93710 |
| TU111366 | lncRNA | upstream | 110222 | 4183755 ~ 4183993 (-) | True | G93716 |
| TU111372 | lncRNA | upstream | 144045 | 4217578 ~ 4217842 (-) | False | LOC113534736 |
| XR_004578376.1 | lncRNA | upstream | 157927 | 4231460 ~ 4231831 (-) | True | LOC117597614 |
| XM_034305336.1 | mRNA | downstream | 19521 | 4049740 ~ 4053694 (-) | True | LOC117597563 |
| XM_026927698.2 | mRNA | downstream | 27745 | 4041522 ~ 4045470 (-) | True | LOC113534744 |
| XM_026927497.2 | mRNA | downstream | 37007 | 4031091 ~ 4036208 (-) | True | LOC113534594 |
| XM_026927506.1 | mRNA | downstream | 44820 | 4025027 ~ 4028395 (-) | True | LOC113534603 |
| XM_026927015.2 | mRNA | downstream | 63281 | 4005783 ~ 4009934 (-) | True | LOC113534321 |
| XM_034305337.1 | mRNA | upstream | 1723 | 4075256 ~ 4076641 (-) | True | LOC117597564 |
| XM_034305338.1 | mRNA | upstream | 3125 | 4076658 ~ 4078462 (-) | True | LOC117597565 |
| XM_034305339.1 | mRNA | upstream | 11589 | 4085122 ~ 4092659 (-) | True | LOC113534742 |
| XM_034305340.1 | mRNA | upstream | 20069 | 4093602 ~ 4100055 (-) | True | LOC113534741 |
| XM_026927500.2 | mRNA | upstream | 31694 | 4105227 ~ 4109059 (-) | True | LOC113534597 |
| XR_004578380.1 | other | downstream | 541524 | 3429028 ~ 3531691 (-) | False | kcnab1a |
| TU110621 | other | downstream | 1304917 | 2759612 ~ 2768298 (-) | True | G93047 |
| TU110620 | other | downstream | 1322046 | 2749388 ~ 2751169 (-) | True | G93046 |
| TU109993 | other | downstream | 2304420 | 1768405 ~ 1768795 (-) | True | G92531 |
| TU109968 | other | downstream | 2424929 | 1628629 ~ 1648286 (-) | False | sema6dl |
| TU111361 | other | upstream | 99755 | 4173288 ~ 4173594 (-) | True | G93711 |
| XR_004578382.1 | other | upstream | 419013 | 4492546 ~ 4492739 (-) | True | LOC117597618 |
| trnam-cau_19 | other | upstream | 2120542 | 6194075 ~ 6194147 (-) | True | trnam-cau_19 |
| trnap-agg | other | upstream | 2791735 | 6865268 ~ 6865339 (-) | True | trnap-agg |
| XR_003403498.2 | other | upstream | 3074411 | 7147944 ~ 7157488 (-) | False | LOC113534453 |
