Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU111561 |
| length | 1187 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G93896 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 4783925 ~ 4785131 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU111413 | lncRNA | downstream | 237220 | 4546439 ~ 4546705 (-) | True | G93753 |
| XR_004578376.1 | lncRNA | downstream | 552094 | 4231460 ~ 4231831 (-) | True | LOC117597614 |
| TU111372 | lncRNA | downstream | 566083 | 4217578 ~ 4217842 (-) | False | LOC113534736 |
| TU111366 | lncRNA | downstream | 599932 | 4183755 ~ 4183993 (-) | True | G93716 |
| TU111360 | lncRNA | downstream | 611613 | 4172073 ~ 4172312 (-) | True | G93710 |
| TU111595 | lncRNA | upstream | 108455 | 4893586 ~ 4894074 (-) | True | G93926 |
| XR_004578349.1 | lncRNA | upstream | 181503 | 4966634 ~ 4971603 (-) | True | LOC117597587 |
| TU111675 | lncRNA | upstream | 222294 | 5007425 ~ 5011433 (-) | True | G93988 |
| TU111702 | lncRNA | upstream | 291009 | 5076140 ~ 5179801 (-) | False | G94010 |
| TU111703 | lncRNA | upstream | 291009 | 5076140 ~ 5179801 (-) | True | G94010 |
| XM_026927227.2 | mRNA | downstream | 106565 | 4642261 ~ 4677360 (-) | True | LOC113534432 |
| XM_026927724.2 | mRNA | downstream | 149168 | 4630852 ~ 4634757 (-) | True | LOC113534774 |
| XM_026927677.2 | mRNA | downstream | 180964 | 4597574 ~ 4602961 (-) | True | LOC113534721 |
| XM_026927678.2 | mRNA | downstream | 189890 | 4589186 ~ 4594035 (-) | True | LOC113534722 |
| XM_034305162.1 | mRNA | downstream | 206353 | 4569303 ~ 4577572 (-) | True | LOC117597542 |
| XM_034305132.1 | mRNA | upstream | 66 | 4785197 ~ 4841034 (-) | True | LOC113534715 |
| XM_026927337.2 | mRNA | upstream | 143209 | 4928340 ~ 4930720 (-) | True | LOC113534489 |
| XM_026927814.2 | mRNA | upstream | 187877 | 4973008 ~ 4976264 (-) | True | p2ry1 |
| XM_026927773.2 | mRNA | upstream | 300143 | 5085274 ~ 5107393 (-) | True | LOC113534806 |
| XM_026927159.2 | mRNA | upstream | 569490 | 5354621 ~ 5372127 (-) | True | ulk3 |
| XR_004578382.1 | other | downstream | 291186 | 4492546 ~ 4492739 (-) | True | LOC117597618 |
| TU111361 | other | downstream | 610331 | 4173288 ~ 4173594 (-) | True | G93711 |
| XR_004578380.1 | other | downstream | 1252234 | 3429028 ~ 3531691 (-) | False | kcnab1a |
| TU110621 | other | downstream | 2015627 | 2759612 ~ 2768298 (-) | True | G93047 |
| TU110620 | other | downstream | 2032756 | 2749388 ~ 2751169 (-) | True | G93046 |
| trnam-cau_19 | other | upstream | 1408944 | 6194075 ~ 6194147 (-) | True | trnam-cau_19 |
| trnap-agg | other | upstream | 2080137 | 6865268 ~ 6865339 (-) | True | trnap-agg |
| XR_003403498.2 | other | upstream | 2362813 | 7147944 ~ 7157488 (-) | False | LOC113534453 |
| XR_003403522.2 | other | upstream | 2657242 | 7442373 ~ 7614096 (-) | False | shank3a |
| TU114125 | other | upstream | 3683170 | 8468301 ~ 8478236 (-) | False | LOC113534821 |
