Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU111741 |
| length | 1170 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 2 |
| gene id | G94045 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 5120028 ~ 5126327 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU111675 | lncRNA | downstream | 108595 | 5007425 ~ 5011433 (-) | True | G93988 |
| XR_004578349.1 | lncRNA | downstream | 148425 | 4966634 ~ 4971603 (-) | True | LOC117597587 |
| TU111595 | lncRNA | downstream | 225954 | 4893586 ~ 4894074 (-) | True | G93926 |
| TU111561 | lncRNA | downstream | 334897 | 4783925 ~ 4785131 (-) | True | G93896 |
| TU111413 | lncRNA | downstream | 573323 | 4546439 ~ 4546705 (-) | True | G93753 |
| TU111756 | lncRNA | upstream | 205747 | 5332074 ~ 5336409 (-) | True | G94058 |
| TU112022 | lncRNA | upstream | 261775 | 5388102 ~ 5391848 (-) | True | G94284 |
| TU112021 | lncRNA | upstream | 263928 | 5390255 ~ 5391848 (-) | False | G94284 |
| TU112069 | lncRNA | upstream | 434228 | 5560555 ~ 5562406 (-) | True | G94325 |
| TU112137 | lncRNA | upstream | 513369 | 5639696 ~ 5642936 (-) | True | ss18l2 |
| XM_026927773.2 | mRNA | downstream | 12635 | 5085274 ~ 5107393 (-) | True | LOC113534806 |
| XM_026927814.2 | mRNA | downstream | 143764 | 4973008 ~ 4976264 (-) | True | p2ry1 |
| XM_026927337.2 | mRNA | downstream | 189308 | 4928340 ~ 4930720 (-) | True | LOC113534489 |
| XM_034305132.1 | mRNA | downstream | 278994 | 4785197 ~ 4841034 (-) | True | LOC113534715 |
| XM_026927227.2 | mRNA | downstream | 442668 | 4642261 ~ 4677360 (-) | True | LOC113534432 |
| XM_026927159.2 | mRNA | upstream | 228294 | 5354621 ~ 5372127 (-) | True | ulk3 |
| XM_026927723.2 | mRNA | upstream | 283240 | 5409567 ~ 5414923 (-) | True | larp6a |
| XM_026926920.2 | mRNA | upstream | 444068 | 5570395 ~ 5583415 (-) | True | gpib |
| XM_026927290.2 | mRNA | upstream | 514286 | 5640613 ~ 5642949 (-) | False | ss18l2 |
| XM_034305201.1 | mRNA | upstream | 518489 | 5644816 ~ 5658105 (-) | False | lsm14ab |
| XR_004578382.1 | other | downstream | 627289 | 4492546 ~ 4492739 (-) | True | LOC117597618 |
| TU111361 | other | downstream | 946434 | 4173288 ~ 4173594 (-) | True | G93711 |
| XR_004578380.1 | other | downstream | 1588337 | 3429028 ~ 3531691 (-) | False | kcnab1a |
| TU110621 | other | downstream | 2351730 | 2759612 ~ 2768298 (-) | True | G93047 |
| TU110620 | other | downstream | 2368859 | 2749388 ~ 2751169 (-) | True | G93046 |
| trnam-cau_19 | other | upstream | 1067748 | 6194075 ~ 6194147 (-) | True | trnam-cau_19 |
| trnap-agg | other | upstream | 1738941 | 6865268 ~ 6865339 (-) | True | trnap-agg |
| XR_003403498.2 | other | upstream | 2021617 | 7147944 ~ 7157488 (-) | False | LOC113534453 |
| XR_003403522.2 | other | upstream | 2316046 | 7442373 ~ 7614096 (-) | False | shank3a |
| TU114125 | other | upstream | 3341974 | 8468301 ~ 8478236 (-) | False | LOC113534821 |
