Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU112194 |
| length | 211 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G94441 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 5703581 ~ 5703791 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU112137 | lncRNA | downstream | 60645 | 5639696 ~ 5642936 (-) | True | ss18l2 |
| TU112135 | lncRNA | downstream | 60645 | 5640920 ~ 5642936 (-) | False | ss18l2 |
| TU112136 | lncRNA | downstream | 60645 | 5641006 ~ 5642936 (-) | False | ss18l2 |
| TU112069 | lncRNA | downstream | 141175 | 5560555 ~ 5562406 (-) | True | G94325 |
| TU112022 | lncRNA | downstream | 311733 | 5388102 ~ 5391848 (-) | True | G94284 |
| TU112144 | lncRNA | upstream | 10052 | 5713843 ~ 5786431 (-) | False | LOC113534829 |
| XR_004578356.1 | lncRNA | upstream | 207977 | 5911768 ~ 5913593 (-) | True | LOC117597596 |
| TU112371 | lncRNA | upstream | 321569 | 6025360 ~ 6029235 (-) | True | G94607 |
| TU112372 | lncRNA | upstream | 325518 | 6029309 ~ 6030675 (-) | True | G94608 |
| TU112506 | lncRNA | upstream | 527065 | 6230856 ~ 6231165 (-) | True | G94728 |
| XM_034305201.1 | mRNA | downstream | 45476 | 5644816 ~ 5658105 (-) | False | lsm14ab |
| XM_034305200.1 | mRNA | downstream | 45476 | 5644816 ~ 5658105 (-) | False | lsm14ab |
| XM_034305199.1 | mRNA | downstream | 45476 | 5644816 ~ 5658105 (-) | True | lsm14ab |
| XM_026927290.2 | mRNA | downstream | 60632 | 5640613 ~ 5642949 (-) | False | ss18l2 |
| XM_026926920.2 | mRNA | downstream | 120166 | 5570395 ~ 5583415 (-) | True | gpib |
| XM_026927800.2 | mRNA | upstream | 52647 | 5756438 ~ 5786423 (-) | False | LOC113534829 |
| XM_026927799.2 | mRNA | upstream | 52647 | 5756438 ~ 5785405 (-) | False | LOC113534829 |
| XM_026927798.2 | mRNA | upstream | 52647 | 5756438 ~ 5784930 (-) | True | LOC113534829 |
| XM_034305479.1 | mRNA | upstream | 88430 | 5792221 ~ 5796056 (-) | True | LOC113534713 |
| XM_034305354.1 | mRNA | upstream | 101886 | 5805677 ~ 5807182 (-) | True | LOC113534712 |
| XR_004578382.1 | other | downstream | 1210842 | 4492546 ~ 4492739 (-) | True | LOC117597618 |
| TU111361 | other | downstream | 1529987 | 4173288 ~ 4173594 (-) | True | G93711 |
| XR_004578380.1 | other | downstream | 2171890 | 3429028 ~ 3531691 (-) | False | kcnab1a |
| TU110621 | other | downstream | 2935283 | 2759612 ~ 2768298 (-) | True | G93047 |
| TU110620 | other | downstream | 2952412 | 2749388 ~ 2751169 (-) | True | G93046 |
| trnam-cau_19 | other | upstream | 490284 | 6194075 ~ 6194147 (-) | True | trnam-cau_19 |
| trnap-agg | other | upstream | 1161477 | 6865268 ~ 6865339 (-) | True | trnap-agg |
| XR_003403498.2 | other | upstream | 1444153 | 7147944 ~ 7157488 (-) | False | LOC113534453 |
| XR_003403522.2 | other | upstream | 1738582 | 7442373 ~ 7614096 (-) | False | shank3a |
| TU114125 | other | upstream | 2764510 | 8468301 ~ 8478236 (-) | False | LOC113534821 |
