Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU112506 |
| length | 310 |
| lncRNA type | intronic |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G94728 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 6230856 ~ 6231165 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU112372 | lncRNA | downstream | 200181 | 6029309 ~ 6030675 (-) | True | G94608 |
| TU112371 | lncRNA | downstream | 201621 | 6025360 ~ 6029235 (-) | True | G94607 |
| XR_004578356.1 | lncRNA | downstream | 317263 | 5911768 ~ 5913593 (-) | True | LOC117597596 |
| TU112144 | lncRNA | downstream | 444425 | 5713843 ~ 5786431 (-) | False | LOC113534829 |
| TU112194 | lncRNA | downstream | 527065 | 5703581 ~ 5703791 (-) | True | G94441 |
| TU112508 | lncRNA | upstream | 1840 | 6233005 ~ 6233239 (-) | True | G94730 |
| TU112510 | lncRNA | upstream | 7516 | 6238681 ~ 6239748 (-) | True | G94732 |
| TU112511 | lncRNA | upstream | 9036 | 6240201 ~ 6240526 (-) | True | G94733 |
| TU112512 | lncRNA | upstream | 9452 | 6240617 ~ 6242160 (-) | True | G94734 |
| TU112513 | lncRNA | upstream | 11424 | 6242589 ~ 6243616 (-) | True | G94735 |
| XM_026927517.2 | mRNA | downstream | 59737 | 6048476 ~ 6171119 (-) | False | gramd1bb |
| XM_026927518.2 | mRNA | downstream | 59737 | 6048476 ~ 6171119 (-) | False | gramd1bb |
| XM_026927515.2 | mRNA | downstream | 59737 | 6048476 ~ 6171119 (-) | True | gramd1bb |
| XM_026927522.2 | mRNA | downstream | 59738 | 6048476 ~ 6171118 (-) | False | gramd1bb |
| XM_026927521.2 | mRNA | downstream | 59738 | 6048476 ~ 6171118 (-) | False | gramd1bb |
| XM_026927410.2 | mRNA | upstream | 245787 | 6476952 ~ 6680208 (-) | True | kirrel3b |
| XM_034305150.1 | mRNA | upstream | 761971 | 6993136 ~ 7035230 (-) | False | ets1 |
| XM_026927119.2 | mRNA | upstream | 761971 | 6993136 ~ 7032742 (-) | False | ets1 |
| XM_026927120.2 | mRNA | upstream | 761971 | 6993136 ~ 7017324 (-) | True | ets1 |
| XM_026927116.2 | mRNA | upstream | 765250 | 6996415 ~ 7035229 (-) | False | ets1 |
| trnam-cau_19 | other | downstream | 36709 | 6194075 ~ 6194147 (-) | True | trnam-cau_19 |
| XR_004578382.1 | other | downstream | 1738117 | 4492546 ~ 4492739 (-) | True | LOC117597618 |
| TU111361 | other | downstream | 2057262 | 4173288 ~ 4173594 (-) | True | G93711 |
| XR_004578380.1 | other | downstream | 2699165 | 3429028 ~ 3531691 (-) | False | kcnab1a |
| TU110621 | other | downstream | 3462558 | 2759612 ~ 2768298 (-) | True | G93047 |
| trnap-agg | other | upstream | 634103 | 6865268 ~ 6865339 (-) | True | trnap-agg |
| XR_003403498.2 | other | upstream | 916779 | 7147944 ~ 7157488 (-) | False | LOC113534453 |
| XR_003403522.2 | other | upstream | 1211208 | 7442373 ~ 7614096 (-) | False | shank3a |
| TU114125 | other | upstream | 2237136 | 8468301 ~ 8478236 (-) | False | LOC113534821 |
| XR_004578315.1 | other | upstream | 4037312 | 10268477 ~ 10294823 (-) | False | ttc38 |
