Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU113311 |
| length | 202 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G95440 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 7336365 ~ 7336566 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU113068 | lncRNA | downstream | 8662 | 7327488 ~ 7327703 (-) | True | G95227 |
| TU112878 | lncRNA | downstream | 248324 | 7086511 ~ 7088041 (-) | True | G95066 |
| TU112884 | lncRNA | downstream | 333731 | 7001648 ~ 7002634 (-) | True | G95072 |
| TU112768 | lncRNA | downstream | 666758 | 6664855 ~ 6669607 (-) | True | G94975 |
| TU112547 | lncRNA | downstream | 950081 | 6385400 ~ 6386284 (-) | True | G94761 |
| TU113322 | lncRNA | upstream | 51166 | 7387732 ~ 7430763 (-) | True | G95449 |
| TU113344 | lncRNA | upstream | 84062 | 7420628 ~ 7421851 (-) | True | G95460 |
| TU113383 | lncRNA | upstream | 142306 | 7478872 ~ 7479107 (-) | True | G95482 |
| TU113668 | lncRNA | upstream | 380023 | 7716589 ~ 7794006 (-) | True | G95752 |
| TU113669 | lncRNA | upstream | 380023 | 7716589 ~ 7794006 (-) | False | G95752 |
| XM_026927482.2 | mRNA | downstream | 24985 | 7296120 ~ 7311380 (-) | True | trpc6b |
| XM_034305078.1 | mRNA | downstream | 25332 | 7296120 ~ 7311033 (-) | False | trpc6b |
| XM_026927036.2 | mRNA | downstream | 42454 | 7284651 ~ 7293911 (-) | True | cfap45 |
| XM_026926938.2 | mRNA | downstream | 53056 | 7274676 ~ 7283309 (-) | False | tbrg1 |
| XM_026926937.2 | mRNA | downstream | 53056 | 7274676 ~ 7283309 (-) | True | tbrg1 |
| XM_026927125.2 | mRNA | upstream | 39575 | 7376141 ~ 7390048 (-) | False | baz1b |
| XM_026927124.2 | mRNA | upstream | 39575 | 7376141 ~ 7390048 (-) | True | baz1b |
| XM_026927001.2 | mRNA | upstream | 55299 | 7391865 ~ 7397642 (-) | True | bcl7bb |
| XM_026927469.2 | mRNA | upstream | 62726 | 7399292 ~ 7403117 (-) | True | tsen34 |
| XM_034305523.1 | mRNA | upstream | 78901 | 7415467 ~ 7418874 (-) | False | LOC117597612 |
| XR_003403498.2 | other | downstream | 178877 | 7147944 ~ 7157488 (-) | False | LOC113534453 |
| trnap-agg | other | downstream | 471026 | 6865268 ~ 6865339 (-) | True | trnap-agg |
| trnam-cau_19 | other | downstream | 1142218 | 6194075 ~ 6194147 (-) | True | trnam-cau_19 |
| XR_004578382.1 | other | downstream | 2843626 | 4492546 ~ 4492739 (-) | True | LOC117597618 |
| TU111361 | other | downstream | 3162771 | 4173288 ~ 4173594 (-) | True | G93711 |
| XR_003403522.2 | other | upstream | 105807 | 7442373 ~ 7614096 (-) | False | shank3a |
| TU114125 | other | upstream | 1131735 | 8468301 ~ 8478236 (-) | False | LOC113534821 |
| XR_004578315.1 | other | upstream | 2931911 | 10268477 ~ 10294823 (-) | False | ttc38 |
| XR_003403495.2 | other | upstream | 2931911 | 10268477 ~ 10294823 (-) | False | ttc38 |
| XR_004578339.1 | other | upstream | 4251435 | 11588001 ~ 11610964 (-) | False | arntl2 |
