Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU113700 |
| length | 236 |
| lncRNA type | read_through |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G95773 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 7820390 ~ 7859029 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU113668 | lncRNA | downstream | 26384 | 7716589 ~ 7794006 (-) | True | G95752 |
| TU113669 | lncRNA | downstream | 26384 | 7716589 ~ 7794006 (-) | False | G95752 |
| TU113383 | lncRNA | downstream | 341283 | 7478872 ~ 7479107 (-) | True | G95482 |
| TU113322 | lncRNA | downstream | 389627 | 7387732 ~ 7430763 (-) | True | G95449 |
| TU113344 | lncRNA | downstream | 398539 | 7420628 ~ 7421851 (-) | True | G95460 |
| TU113718 | lncRNA | upstream | 2493 | 7861522 ~ 7861806 (-) | True | G95783 |
| TU113720 | lncRNA | upstream | 13704 | 7872733 ~ 7873314 (-) | True | G95785 |
| TU113752 | lncRNA | upstream | 90733 | 7949762 ~ 7949962 (-) | True | G95815 |
| TU113772 | lncRNA | upstream | 125685 | 7984714 ~ 7984930 (-) | True | G95835 |
| XR_004578311.1 | lncRNA | upstream | 150098 | 8009127 ~ 8013279 (-) | True | LOC117597533 |
| XM_026927297.2 | mRNA | downstream | 2793 | 7811040 ~ 7817597 (-) | False | sephs1 |
| XM_034305145.1 | mRNA | downstream | 2801 | 7811040 ~ 7817589 (-) | False | sephs1 |
| XM_026927298.2 | mRNA | downstream | 5230 | 7810212 ~ 7815160 (-) | True | sephs1 |
| XM_026927027.2 | mRNA | downstream | 39992 | 7729088 ~ 7780398 (-) | False | mapk8ip2 |
| XM_026927026.2 | mRNA | downstream | 39992 | 7729088 ~ 7780398 (-) | True | mapk8ip2 |
| XM_034305157.1 | mRNA | upstream | 186398 | 8045427 ~ 8060973 (-) | False | prrt4 |
| XM_026927107.2 | mRNA | upstream | 186398 | 8045427 ~ 8053699 (-) | False | prrt4 |
| XM_026927108.2 | mRNA | upstream | 186398 | 8045427 ~ 8053699 (-) | True | prrt4 |
| XM_034304934.1 | mRNA | upstream | 228407 | 8087436 ~ 8113093 (-) | False | lepa |
| XM_034304933.1 | mRNA | upstream | 228407 | 8087436 ~ 8094263 (-) | False | lepa |
| XR_003403522.2 | other | downstream | 206294 | 7442373 ~ 7614096 (-) | False | shank3a |
| XR_003403498.2 | other | downstream | 662902 | 7147944 ~ 7157488 (-) | False | LOC113534453 |
| trnap-agg | other | downstream | 955051 | 6865268 ~ 6865339 (-) | True | trnap-agg |
| trnam-cau_19 | other | downstream | 1626243 | 6194075 ~ 6194147 (-) | True | trnam-cau_19 |
| XR_004578382.1 | other | downstream | 3327651 | 4492546 ~ 4492739 (-) | True | LOC117597618 |
| TU114125 | other | upstream | 609272 | 8468301 ~ 8478236 (-) | False | LOC113534821 |
| XR_004578315.1 | other | upstream | 2409448 | 10268477 ~ 10294823 (-) | False | ttc38 |
| XR_003403495.2 | other | upstream | 2409448 | 10268477 ~ 10294823 (-) | False | ttc38 |
| XR_004578339.1 | other | upstream | 3728972 | 11588001 ~ 11610964 (-) | False | arntl2 |
| TU116624 | other | upstream | 4453053 | 12312082 ~ 12314525 (-) | False | admb |
