Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU113772 |
| length | 217 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G95835 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 7984714 ~ 7984930 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU113752 | lncRNA | downstream | 34752 | 7949762 ~ 7949962 (-) | True | G95815 |
| TU113720 | lncRNA | downstream | 111400 | 7872733 ~ 7873314 (-) | True | G95785 |
| TU113718 | lncRNA | downstream | 122908 | 7861522 ~ 7861806 (-) | True | G95783 |
| TU113700 | lncRNA | downstream | 125685 | 7820390 ~ 7859029 (-) | True | G95773 |
| TU113668 | lncRNA | downstream | 190708 | 7716589 ~ 7794006 (-) | True | G95752 |
| XR_004578311.1 | lncRNA | upstream | 24197 | 8009127 ~ 8013279 (-) | True | LOC117597533 |
| TU113790 | lncRNA | upstream | 24634 | 8009564 ~ 8013412 (-) | False | LOC117597533 |
| XR_004578310.1 | lncRNA | upstream | 29225 | 8014155 ~ 8016621 (-) | True | LOC117597532 |
| TU113851 | lncRNA | upstream | 95286 | 8080216 ~ 8083572 (-) | True | G95907 |
| XR_004578351.1 | lncRNA | upstream | 341901 | 8326831 ~ 8344658 (-) | True | LOC113534629 |
| XM_026927257.2 | mRNA | downstream | 7797 | 7847835 ~ 7976917 (-) | False | frmd4a |
| XM_026927256.2 | mRNA | downstream | 34266 | 7847835 ~ 7950448 (-) | False | frmd4a |
| XM_026927253.2 | mRNA | downstream | 43906 | 7847835 ~ 7940808 (-) | False | frmd4a |
| XM_026927252.2 | mRNA | downstream | 43907 | 7847835 ~ 7940807 (-) | False | frmd4a |
| XM_026927255.2 | mRNA | downstream | 60538 | 7851293 ~ 7924176 (-) | False | frmd4a |
| XM_034305157.1 | mRNA | upstream | 60497 | 8045427 ~ 8060973 (-) | False | prrt4 |
| XM_026927107.2 | mRNA | upstream | 60497 | 8045427 ~ 8053699 (-) | False | prrt4 |
| XM_026927108.2 | mRNA | upstream | 60497 | 8045427 ~ 8053699 (-) | True | prrt4 |
| XM_034304934.1 | mRNA | upstream | 102506 | 8087436 ~ 8113093 (-) | False | lepa |
| XM_034304933.1 | mRNA | upstream | 102506 | 8087436 ~ 8094263 (-) | False | lepa |
| XR_003403522.2 | other | downstream | 370618 | 7442373 ~ 7614096 (-) | False | shank3a |
| XR_003403498.2 | other | downstream | 827226 | 7147944 ~ 7157488 (-) | False | LOC113534453 |
| trnap-agg | other | downstream | 1119375 | 6865268 ~ 6865339 (-) | True | trnap-agg |
| trnam-cau_19 | other | downstream | 1790567 | 6194075 ~ 6194147 (-) | True | trnam-cau_19 |
| XR_004578382.1 | other | downstream | 3491975 | 4492546 ~ 4492739 (-) | True | LOC117597618 |
| TU114125 | other | upstream | 483371 | 8468301 ~ 8478236 (-) | False | LOC113534821 |
| XR_004578315.1 | other | upstream | 2283547 | 10268477 ~ 10294823 (-) | False | ttc38 |
| XR_003403495.2 | other | upstream | 2283547 | 10268477 ~ 10294823 (-) | False | ttc38 |
| XR_004578339.1 | other | upstream | 3603071 | 11588001 ~ 11610964 (-) | False | arntl2 |
| TU116624 | other | upstream | 4327152 | 12312082 ~ 12314525 (-) | False | admb |
