Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU115308 |
| length | 1135 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G97172 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 10369263 ~ 10370417 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU115237 | lncRNA | downstream | 97313 | 10266978 ~ 10271950 (-) | True | ttc38 |
| TU115159 | lncRNA | downstream | 273905 | 10071553 ~ 10095358 (-) | True | G97054 |
| TU114927 | lncRNA | downstream | 450830 | 9892526 ~ 9918433 (-) | True | tmtc2b |
| TU114926 | lncRNA | downstream | 484808 | 9819387 ~ 9884455 (-) | True | G96840 |
| TU114861 | lncRNA | downstream | 597243 | 9750882 ~ 9772020 (-) | False | LOC113534661 |
| TU115309 | lncRNA | upstream | 331 | 10370748 ~ 10371325 (-) | True | G97173 |
| TU115347 | lncRNA | upstream | 108650 | 10479067 ~ 10479287 (-) | True | G97204 |
| TU115367 | lncRNA | upstream | 148680 | 10519097 ~ 10519305 (-) | True | G97224 |
| TU115368 | lncRNA | upstream | 150378 | 10520795 ~ 10520997 (-) | True | G97225 |
| TU115345 | lncRNA | upstream | 156693 | 10527110 ~ 10529510 (-) | False | si:dkey-246g23.2 |
| XM_034305256.1 | mRNA | downstream | 20533 | 10295851 ~ 10348730 (-) | False | mical3a |
| XM_034305233.1 | mRNA | downstream | 20533 | 10295851 ~ 10348730 (-) | False | mical3a |
| XM_034305232.1 | mRNA | downstream | 20533 | 10295851 ~ 10348730 (-) | False | mical3a |
| XM_034305255.1 | mRNA | downstream | 20533 | 10295851 ~ 10348730 (-) | False | mical3a |
| XM_034305229.1 | mRNA | downstream | 20533 | 10295851 ~ 10348730 (-) | False | mical3a |
| XM_026926926.2 | mRNA | upstream | 55323 | 10425740 ~ 10439871 (-) | False | wfdc1 |
| XM_026926925.2 | mRNA | upstream | 55323 | 10425740 ~ 10439870 (-) | True | wfdc1 |
| XM_034305362.1 | mRNA | upstream | 78569 | 10448986 ~ 10453158 (-) | True | si:dkey-246g23.4 |
| XM_026927066.2 | mRNA | upstream | 106769 | 10477186 ~ 10505123 (-) | True | kcng4a |
| XM_026927354.2 | mRNA | upstream | 157760 | 10528177 ~ 10581902 (-) | True | si:dkey-246g23.2 |
| XR_004578315.1 | other | downstream | 74440 | 10268477 ~ 10294823 (-) | False | ttc38 |
| XR_003403495.2 | other | downstream | 74440 | 10268477 ~ 10294823 (-) | False | ttc38 |
| TU114125 | other | downstream | 1891027 | 8468301 ~ 8478236 (-) | False | LOC113534821 |
| XR_003403522.2 | other | downstream | 2755167 | 7442373 ~ 7614096 (-) | False | shank3a |
| XR_003403498.2 | other | downstream | 3211775 | 7147944 ~ 7157488 (-) | False | LOC113534453 |
| XR_004578339.1 | other | upstream | 1217584 | 11588001 ~ 11610964 (-) | False | arntl2 |
| TU116624 | other | upstream | 1941665 | 12312082 ~ 12314525 (-) | False | admb |
| XR_003403510.2 | other | upstream | 2027270 | 12397687 ~ 12405281 (-) | False | znf143b |
| TU116638 | other | upstream | 2050685 | 12421102 ~ 12423978 (-) | True | akip1 |
| TU117111 | other | upstream | 2675406 | 13045823 ~ 13052311 (-) | True | G98770 |
