Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU115347 |
| length | 221 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G97204 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 10479067 ~ 10479287 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU115309 | lncRNA | downstream | 107742 | 10370748 ~ 10371325 (-) | True | G97173 |
| TU115308 | lncRNA | downstream | 108650 | 10369263 ~ 10370417 (-) | True | G97172 |
| TU115237 | lncRNA | downstream | 207117 | 10266978 ~ 10271950 (-) | True | ttc38 |
| TU115159 | lncRNA | downstream | 383709 | 10071553 ~ 10095358 (-) | True | G97054 |
| TU114927 | lncRNA | downstream | 560634 | 9892526 ~ 9918433 (-) | True | tmtc2b |
| TU115367 | lncRNA | upstream | 39810 | 10519097 ~ 10519305 (-) | True | G97224 |
| TU115368 | lncRNA | upstream | 41508 | 10520795 ~ 10520997 (-) | True | G97225 |
| TU115345 | lncRNA | upstream | 47823 | 10527110 ~ 10529510 (-) | False | si:dkey-246g23.2 |
| TU115392 | lncRNA | upstream | 177905 | 10657192 ~ 10661052 (-) | True | G97246 |
| TU115763 | lncRNA | upstream | 693400 | 11172687 ~ 11174173 (-) | False | |
| XM_034305362.1 | mRNA | downstream | 25909 | 10448986 ~ 10453158 (-) | True | si:dkey-246g23.4 |
| XM_026926926.2 | mRNA | downstream | 39196 | 10425740 ~ 10439871 (-) | False | wfdc1 |
| XM_026926925.2 | mRNA | downstream | 39197 | 10425740 ~ 10439870 (-) | True | wfdc1 |
| XM_034305228.1 | mRNA | downstream | 80192 | 10295851 ~ 10398875 (-) | False | mical3a |
| XM_034305227.1 | mRNA | downstream | 80192 | 10295851 ~ 10398875 (-) | True | mical3a |
| XM_026927354.2 | mRNA | upstream | 48890 | 10528177 ~ 10581902 (-) | True | si:dkey-246g23.2 |
| XM_026927352.2 | mRNA | upstream | 51459 | 10530746 ~ 10581902 (-) | False | si:dkey-246g23.2 |
| XM_026927353.2 | mRNA | upstream | 51459 | 10530746 ~ 10581174 (-) | False | si:dkey-246g23.2 |
| XM_026927578.2 | mRNA | upstream | 107635 | 10586922 ~ 10642050 (-) | False | zgc:173742 |
| XM_026927579.2 | mRNA | upstream | 107635 | 10586922 ~ 10641724 (-) | False | zgc:173742 |
| XR_004578315.1 | other | downstream | 184244 | 10268477 ~ 10294823 (-) | False | ttc38 |
| XR_003403495.2 | other | downstream | 184244 | 10268477 ~ 10294823 (-) | False | ttc38 |
| TU114125 | other | downstream | 2000831 | 8468301 ~ 8478236 (-) | False | LOC113534821 |
| XR_003403522.2 | other | downstream | 2864971 | 7442373 ~ 7614096 (-) | False | shank3a |
| XR_003403498.2 | other | downstream | 3321579 | 7147944 ~ 7157488 (-) | False | LOC113534453 |
| XR_004578339.1 | other | upstream | 1108714 | 11588001 ~ 11610964 (-) | False | arntl2 |
| TU116624 | other | upstream | 1832795 | 12312082 ~ 12314525 (-) | False | admb |
| XR_003403510.2 | other | upstream | 1918400 | 12397687 ~ 12405281 (-) | False | znf143b |
| TU116638 | other | upstream | 1941815 | 12421102 ~ 12423978 (-) | True | akip1 |
| TU117111 | other | upstream | 2566536 | 13045823 ~ 13052311 (-) | True | G98770 |
