Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU120103 |
| length | 211 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G101418 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 18597480 ~ 18597690 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120094 | lncRNA | downstream | 37866 | 18559319 ~ 18559614 (-) | True | G101409 |
| TU120093 | lncRNA | downstream | 42287 | 18554876 ~ 18555193 (-) | True | G101408 |
| TU120091 | lncRNA | downstream | 45277 | 18551917 ~ 18552203 (-) | True | G101406 |
| TU120090 | lncRNA | downstream | 45755 | 18551441 ~ 18551725 (-) | True | G101405 |
| TU120068 | lncRNA | downstream | 68766 | 18525485 ~ 18528714 (-) | True | G101383 |
| TU120105 | lncRNA | upstream | 1161 | 18598851 ~ 18599367 (-) | True | G101420 |
| TU120166 | lncRNA | upstream | 52752 | 18650442 ~ 18652261 (-) | True | G101478 |
| TU120171 | lncRNA | upstream | 75774 | 18673464 ~ 18676017 (-) | True | G101483 |
| TU120157 | lncRNA | upstream | 81041 | 18678731 ~ 18681725 (-) | True | G101469 |
| TU120153 | lncRNA | upstream | 110228 | 18707918 ~ 18732829 (-) | True | G101467 |
| XM_026932720.2 | mRNA | downstream | 73254 | 18282619 ~ 18524226 (-) | False | rasgrf1 |
| XM_034305502.1 | mRNA | downstream | 73254 | 18282619 ~ 18524226 (-) | True | rasgrf1 |
| XM_034305503.1 | mRNA | downstream | 87931 | 18282619 ~ 18509549 (-) | False | rasgrf1 |
| XM_034305505.1 | mRNA | downstream | 88080 | 18282619 ~ 18509400 (-) | False | rasgrf1 |
| XM_034305504.1 | mRNA | downstream | 110651 | 18282619 ~ 18486829 (-) | False | rasgrf1 |
| XM_034305474.1 | mRNA | upstream | 136737 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_026932413.2 | mRNA | upstream | 136737 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_034305473.1 | mRNA | upstream | 136737 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_026932412.2 | mRNA | upstream | 136737 | 18734427 ~ 18741724 (-) | True | znf710a |
| XM_026913714.2 | mRNA | upstream | 712198 | 19309888 ~ 19333430 (-) | True | dhx34 |
| TU119855 | other | downstream | 400674 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_004578368.1 | other | downstream | 510509 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU118530 | other | downstream | 3242843 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_003403523.2 | other | downstream | 4250472 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003403533.2 | other | downstream | 4808633 | 13788751 ~ 13788847 (-) | True | LOC113534839 |
| XR_003402833.1 | other | upstream | 753072 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| XR_003402829.1 | other | upstream | 1382379 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| TU121422 | other | upstream | 2355912 | 20953602 ~ 20966910 (-) | True | G102566 |
| XR_004578325.1 | other | upstream | 2397651 | 20995341 ~ 21013100 (-) | False | sertad3 |
| XR_004578321.1 | other | upstream | 3637013 | 22234703 ~ 22306769 (-) | False | si |
