Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU120171 |
| length | 218 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | G101483 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 18673464 ~ 18676017 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120166 | lncRNA | downstream | 21203 | 18650442 ~ 18652261 (-) | True | G101478 |
| TU120105 | lncRNA | downstream | 74097 | 18598851 ~ 18599367 (-) | True | G101420 |
| TU120103 | lncRNA | downstream | 75774 | 18597480 ~ 18597690 (-) | True | G101418 |
| TU120094 | lncRNA | downstream | 113850 | 18559319 ~ 18559614 (-) | True | G101409 |
| TU120093 | lncRNA | downstream | 118271 | 18554876 ~ 18555193 (-) | True | G101408 |
| TU120157 | lncRNA | upstream | 2714 | 18678731 ~ 18681725 (-) | True | G101469 |
| TU120153 | lncRNA | upstream | 31901 | 18707918 ~ 18732829 (-) | True | G101467 |
| TU120154 | lncRNA | upstream | 54483 | 18730500 ~ 18732829 (-) | False | G101467 |
| TU120176 | lncRNA | upstream | 70128 | 18746145 ~ 18746365 (-) | True | G101488 |
| TU120195 | lncRNA | upstream | 87333 | 18763350 ~ 18763597 (-) | True | G101507 |
| XM_026932720.2 | mRNA | downstream | 149238 | 18282619 ~ 18524226 (-) | False | rasgrf1 |
| XM_034305502.1 | mRNA | downstream | 149238 | 18282619 ~ 18524226 (-) | True | rasgrf1 |
| XM_034305503.1 | mRNA | downstream | 163915 | 18282619 ~ 18509549 (-) | False | rasgrf1 |
| XM_034305505.1 | mRNA | downstream | 164064 | 18282619 ~ 18509400 (-) | False | rasgrf1 |
| XM_034305504.1 | mRNA | downstream | 186635 | 18282619 ~ 18486829 (-) | False | rasgrf1 |
| XM_034305474.1 | mRNA | upstream | 58410 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_026932413.2 | mRNA | upstream | 58410 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_034305473.1 | mRNA | upstream | 58410 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_026932412.2 | mRNA | upstream | 58410 | 18734427 ~ 18741724 (-) | True | znf710a |
| XM_026913714.2 | mRNA | upstream | 633871 | 19309888 ~ 19333430 (-) | True | dhx34 |
| TU119855 | other | downstream | 476658 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_004578368.1 | other | downstream | 586493 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU118530 | other | downstream | 3318827 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_003403523.2 | other | downstream | 4326456 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003403533.2 | other | downstream | 4884617 | 13788751 ~ 13788847 (-) | True | LOC113534839 |
| XR_003402833.1 | other | upstream | 674745 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| XR_003402829.1 | other | upstream | 1304052 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| TU121422 | other | upstream | 2277585 | 20953602 ~ 20966910 (-) | True | G102566 |
| XR_004578325.1 | other | upstream | 2319324 | 20995341 ~ 21013100 (-) | False | sertad3 |
| XR_004578321.1 | other | upstream | 3558686 | 22234703 ~ 22306769 (-) | False | si |
