Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU120176 |
| length | 221 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G101488 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 18746145 ~ 18746365 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120153 | lncRNA | downstream | 13316 | 18707918 ~ 18732829 (-) | True | G101467 |
| TU120154 | lncRNA | downstream | 13316 | 18730500 ~ 18732829 (-) | False | G101467 |
| TU120157 | lncRNA | downstream | 64420 | 18678731 ~ 18681725 (-) | True | G101469 |
| TU120171 | lncRNA | downstream | 70128 | 18673464 ~ 18676017 (-) | True | G101483 |
| TU120166 | lncRNA | downstream | 93884 | 18650442 ~ 18652261 (-) | True | G101478 |
| TU120195 | lncRNA | upstream | 16985 | 18763350 ~ 18763597 (-) | True | G101507 |
| TU120196 | lncRNA | upstream | 17596 | 18763961 ~ 18764168 (-) | True | G101508 |
| TU120197 | lncRNA | upstream | 18831 | 18765196 ~ 18765422 (-) | True | G101509 |
| TU120209 | lncRNA | upstream | 47254 | 18793619 ~ 18794802 (-) | True | G101521 |
| TU120232 | lncRNA | upstream | 55870 | 18802235 ~ 18802651 (-) | True | G101542 |
| XM_034305474.1 | mRNA | downstream | 4421 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_026932413.2 | mRNA | downstream | 4421 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_034305473.1 | mRNA | downstream | 4421 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_026932412.2 | mRNA | downstream | 4421 | 18734427 ~ 18741724 (-) | True | znf710a |
| XM_026932720.2 | mRNA | downstream | 221919 | 18282619 ~ 18524226 (-) | False | rasgrf1 |
| XM_026913714.2 | mRNA | upstream | 563523 | 19309888 ~ 19333430 (-) | True | dhx34 |
| XM_026913684.2 | mRNA | upstream | 660685 | 19407050 ~ 19496993 (-) | True | pik3c2a |
| XM_026913687.2 | mRNA | upstream | 660685 | 19407050 ~ 19496990 (-) | False | pik3c2a |
| XM_026913612.2 | mRNA | upstream | 1304967 | 20051332 ~ 20054436 (-) | True | LOC113526513 |
| XM_026913745.2 | mRNA | upstream | 1468777 | 20215142 ~ 20292323 (-) | True | nectin1b |
| TU119855 | other | downstream | 549339 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_004578368.1 | other | downstream | 659174 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU118530 | other | downstream | 3391508 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_003403523.2 | other | downstream | 4399137 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003403533.2 | other | downstream | 4957298 | 13788751 ~ 13788847 (-) | True | LOC113534839 |
| XR_003402833.1 | other | upstream | 604397 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| XR_003402829.1 | other | upstream | 1233704 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| TU121422 | other | upstream | 2207237 | 20953602 ~ 20966910 (-) | True | G102566 |
| XR_004578325.1 | other | upstream | 2248976 | 20995341 ~ 21013100 (-) | False | sertad3 |
| XR_004578321.1 | other | upstream | 3488338 | 22234703 ~ 22306769 (-) | False | si |
