Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU120585 |
| length | 576 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 3 |
| gene id | LOC113526920 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 19362572 ~ 19363809 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko03460 | Fanconi anemia pathway |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120579 | lncRNA | downstream | 1564 | 19360792 ~ 19361008 (-) | True | G101865 |
| TU120553 | lncRNA | downstream | 63210 | 19298891 ~ 19299362 (-) | True | G101846 |
| TU120514 | lncRNA | downstream | 109209 | 19252853 ~ 19253363 (-) | True | G101809 |
| TU120510 | lncRNA | downstream | 121423 | 19240171 ~ 19241149 (-) | True | G101805 |
| TU120451 | lncRNA | downstream | 235213 | 19126638 ~ 19127359 (-) | True | G101750 |
| TU120659 | lncRNA | upstream | 31262 | 19395071 ~ 19395304 (-) | True | G101932 |
| TU120665 | lncRNA | upstream | 126720 | 19490529 ~ 19491255 (-) | True | G101938 |
| TU120668 | lncRNA | upstream | 136528 | 19500337 ~ 19583769 (-) | True | G101939 |
| XR_003402812.2 | lncRNA | upstream | 150990 | 19514799 ~ 19517762 (-) | True | LOC113526834 |
| TU120685 | lncRNA | upstream | 221831 | 19585640 ~ 19585839 (-) | True | G101955 |
| XM_026913714.2 | mRNA | downstream | 29142 | 19309888 ~ 19333430 (-) | True | dhx34 |
| XM_034305474.1 | mRNA | downstream | 620848 | 18734427 ~ 18741724 (-) | False | znf710a |
| XM_026913684.2 | mRNA | upstream | 43241 | 19407050 ~ 19496993 (-) | True | pik3c2a |
| XM_026913687.2 | mRNA | upstream | 43241 | 19407050 ~ 19496990 (-) | False | pik3c2a |
| XM_026913612.2 | mRNA | upstream | 687523 | 20051332 ~ 20054436 (-) | True | LOC113526513 |
| XM_026913745.2 | mRNA | upstream | 851333 | 20215142 ~ 20292323 (-) | True | nectin1b |
| XM_026913303.2 | mRNA | upstream | 998521 | 20362330 ~ 20377332 (-) | True | si:ch211-132b12.7 |
| XR_003402833.1 | other | downstream | 11629 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| TU119855 | other | downstream | 1165766 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_004578368.1 | other | downstream | 1275601 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU118530 | other | downstream | 4007935 | 15347166 ~ 15354637 (-) | True | tmem170a |
| XR_003403523.2 | other | downstream | 5015564 | 14335936 ~ 14347008 (-) | False | dennd11 |
| XR_003402829.1 | other | upstream | 616260 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| TU121422 | other | upstream | 1589793 | 20953602 ~ 20966910 (-) | True | G102566 |
| XR_004578325.1 | other | upstream | 1631532 | 20995341 ~ 21013100 (-) | False | sertad3 |
| XR_004578321.1 | other | upstream | 2870894 | 22234703 ~ 22306769 (-) | False | si |
| XR_004578330.1 | other | upstream | 4227136 | 23590945 ~ 23610448 (-) | True | mmp23bb |
