Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU122108 |
| length | 332 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G103161 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 22228385 ~ 22228716 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU122106 | lncRNA | downstream | 522 | 22227628 ~ 22227863 (-) | True | G103159 |
| TU122105 | lncRNA | downstream | 3821 | 22224329 ~ 22224564 (-) | True | G103158 |
| TU122103 | lncRNA | downstream | 4364 | 22223585 ~ 22224021 (-) | True | G103156 |
| TU122044 | lncRNA | downstream | 432142 | 21795773 ~ 21796243 (-) | True | G103099 |
| TU121921 | lncRNA | downstream | 575611 | 21570431 ~ 21652774 (-) | True | G102983 |
| TU122186 | lncRNA | upstream | 107230 | 22335946 ~ 22336703 (-) | True | G103235 |
| TU122387 | lncRNA | upstream | 637208 | 22865924 ~ 22883153 (-) | True | G103410 |
| TU122418 | lncRNA | upstream | 699453 | 22928169 ~ 22936046 (-) | True | G103436 |
| TU122573 | lncRNA | upstream | 990306 | 23219022 ~ 23259188 (-) | True | G103576 |
| TU122600 | lncRNA | upstream | 1034091 | 23262807 ~ 23263083 (-) | True | G103600 |
| XM_026913317.2 | mRNA | downstream | 564058 | 21641638 ~ 21664327 (-) | True | serpini1 |
| XM_026913538.2 | mRNA | downstream | 593828 | 21623853 ~ 21634557 (-) | False | LOC113526476 |
| XM_026913536.2 | mRNA | downstream | 593828 | 21623853 ~ 21634557 (-) | True | LOC113526476 |
| XM_034305085.1 | mRNA | downstream | 653539 | 21495122 ~ 21574846 (-) | True | ppfia1 |
| XM_034305498.1 | mRNA | downstream | 735904 | 21467974 ~ 21492481 (-) | True | LOC113526680 |
| XM_034305154.1 | mRNA | upstream | 2732 | 22231448 ~ 22306769 (-) | True | si |
| XM_026913500.2 | mRNA | upstream | 108044 | 22336760 ~ 22341441 (-) | True | slitrk3a |
| XM_026914311.2 | mRNA | upstream | 921392 | 23150108 ~ 23153649 (-) | True | LOC113526884 |
| XM_026914213.2 | mRNA | upstream | 930016 | 23158732 ~ 23162309 (-) | True | LOC113526825 |
| XM_026914031.2 | mRNA | upstream | 1068639 | 23297355 ~ 23299010 (-) | True | aamdc |
| XR_004578325.1 | other | downstream | 1215285 | 20995341 ~ 21013100 (-) | False | sertad3 |
| TU121422 | other | downstream | 1261475 | 20953602 ~ 20966910 (-) | True | G102566 |
| XR_003402829.1 | other | downstream | 2248126 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| XR_003402833.1 | other | downstream | 2877442 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| TU119855 | other | downstream | 4031579 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_004578321.1 | other | upstream | 5987 | 22234703 ~ 22306769 (-) | False | si |
| XR_004578330.1 | other | upstream | 1362229 | 23590945 ~ 23610448 (-) | True | mmp23bb |
| TU123617 | other | upstream | 2394800 | 24623516 ~ 24711368 (-) | True | G104473 |
| XR_003402792.2 | other | upstream | 2523896 | 24752612 ~ 24762781 (-) | False | clasrp |
| XR_003402763.2 | other | upstream | 3156609 | 25385325 ~ 25548928 (-) | False | si:cabz01090165.1 |
