Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU123452 |
| length | 647 |
| lncRNA type | intronic |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G104320 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 24533737 ~ 24534419 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU123423 | lncRNA | downstream | 49665 | 24480361 ~ 24484072 (-) | False | sipa1l3 |
| TU123422 | lncRNA | downstream | 49665 | 24480391 ~ 24484072 (-) | False | sipa1l3 |
| TU123411 | lncRNA | downstream | 69159 | 24414900 ~ 24464578 (-) | True | G104291 |
| TU123014 | lncRNA | downstream | 794998 | 23732870 ~ 23738739 (-) | True | rpl35a |
| TU123018 | lncRNA | downstream | 794998 | 23732870 ~ 23738739 (-) | False | rpl35a |
| TU123618 | lncRNA | upstream | 97239 | 24631658 ~ 24661348 (-) | False | ttc9b |
| TU123851 | lncRNA | upstream | 509367 | 25043786 ~ 25079487 (-) | False | tmem91 |
| TU123870 | lncRNA | upstream | 579558 | 25113977 ~ 25151156 (-) | False | G104694 |
| TU123871 | lncRNA | upstream | 611941 | 25146360 ~ 25151156 (-) | True | G104694 |
| XR_004578344.1 | lncRNA | upstream | 657638 | 25192057 ~ 25214790 (-) | True | LOC117597583 |
| XM_026913860.2 | mRNA | downstream | 55765 | 24469967 ~ 24477972 (-) | True | qpctla |
| XM_034305055.1 | mRNA | downstream | 92123 | 24436290 ~ 24441614 (-) | False | tbcb |
| XM_026914089.2 | mRNA | downstream | 92130 | 24436290 ~ 24441607 (-) | True | tbcb |
| XM_026914088.2 | mRNA | downstream | 92132 | 24436290 ~ 24441605 (-) | False | tbcb |
| XM_026914334.2 | mRNA | downstream | 100492 | 24427587 ~ 24433245 (-) | False | tmem123 |
| XM_026913281.2 | mRNA | upstream | 97220 | 24631639 ~ 24661978 (-) | True | ttc9b |
| XM_026914481.2 | mRNA | upstream | 132642 | 24667061 ~ 24674856 (-) | False | c6h19orf47 |
| XM_026914480.2 | mRNA | upstream | 132642 | 24667061 ~ 24674841 (-) | False | c6h19orf47 |
| XM_034305321.1 | mRNA | upstream | 132642 | 24667061 ~ 24674707 (-) | True | c6h19orf47 |
| XM_026914377.2 | mRNA | upstream | 146348 | 24680767 ~ 24686249 (-) | False | fosb |
| XR_004578330.1 | other | downstream | 923289 | 23590945 ~ 23610448 (-) | True | mmp23bb |
| XR_004578321.1 | other | downstream | 2226968 | 22234703 ~ 22306769 (-) | False | si |
| XR_004578325.1 | other | downstream | 3520637 | 20995341 ~ 21013100 (-) | False | sertad3 |
| TU121422 | other | downstream | 3566827 | 20953602 ~ 20966910 (-) | True | G102566 |
| XR_003402829.1 | other | downstream | 4553478 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| TU123617 | other | upstream | 89097 | 24623516 ~ 24711368 (-) | True | G104473 |
| XR_003402792.2 | other | upstream | 218193 | 24752612 ~ 24762781 (-) | False | clasrp |
| XR_003402763.2 | other | upstream | 850906 | 25385325 ~ 25548928 (-) | False | si:cabz01090165.1 |
| XR_003402762.2 | other | upstream | 850906 | 25385325 ~ 25548928 (-) | True | si:cabz01090165.1 |
| XR_003402764.2 | other | upstream | 850906 | 25385325 ~ 25485121 (-) | False | si:cabz01090165.1 |
