Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU125660 |
| length | 218 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G106258 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 27944816 ~ 27945033 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU125592 | lncRNA | downstream | 39787 | 27861840 ~ 27905029 (-) | True | G106195 |
| TU125590 | lncRNA | downstream | 163016 | 27779132 ~ 27781800 (-) | True | G106193 |
| XR_003402778.1 | lncRNA | downstream | 756024 | 27188342 ~ 27188792 (-) | True | LOC113526487 |
| XR_004578372.1 | lncRNA | downstream | 799942 | 27143707 ~ 27144874 (-) | True | LOC117597606 |
| TU125118 | lncRNA | downstream | 815644 | 27123277 ~ 27129172 (-) | True | G105842 |
| TU125661 | lncRNA | upstream | 8485 | 27953518 ~ 27953990 (-) | True | G106259 |
| TU125662 | lncRNA | upstream | 9231 | 27954264 ~ 27954479 (-) | True | G106260 |
| TU125666 | lncRNA | upstream | 18738 | 27963771 ~ 27964010 (-) | True | G106264 |
| TU125667 | lncRNA | upstream | 20030 | 27965063 ~ 27966251 (-) | True | G106265 |
| TU125671 | lncRNA | upstream | 22949 | 27967982 ~ 27968201 (-) | True | G106269 |
| XM_026914328.2 | mRNA | downstream | 4994 | 27925890 ~ 27939822 (-) | True | LOC113526894 |
| XM_026913761.2 | mRNA | downstream | 66197 | 27865109 ~ 27878619 (-) | True | zdhhc7 |
| XM_026913760.2 | mRNA | downstream | 66198 | 27865109 ~ 27878618 (-) | False | zdhhc7 |
| XM_026914111.2 | mRNA | downstream | 85455 | 27854836 ~ 27859361 (-) | True | cog8 |
| XM_026914381.2 | mRNA | downstream | 97994 | 27825324 ~ 27846822 (-) | False | wdr59 |
| XM_026913729.2 | mRNA | upstream | 238500 | 28183533 ~ 28205626 (-) | False | LOC113526564 |
| XM_026913728.2 | mRNA | upstream | 238500 | 28183533 ~ 28205624 (-) | True | LOC113526564 |
| XM_026913722.2 | mRNA | upstream | 284405 | 28229438 ~ 28233387 (-) | True | foxf1 |
| XM_026914417.2 | mRNA | upstream | 470102 | 28415135 ~ 28422985 (-) | True | irf8 |
| XM_026914419.2 | mRNA | upstream | 478764 | 28423797 ~ 28446913 (-) | True | dusp22a |
| TU125182 | other | downstream | 787676 | 27152312 ~ 27157140 (-) | False | si:dkey-151j17.4 |
| TU124747 | other | downstream | 1336487 | 26569085 ~ 26608329 (-) | False | LOC113526510 |
| TU124615 | other | downstream | 1703811 | 26239330 ~ 26241005 (-) | True | G105376 |
| XR_003402762.2 | other | downstream | 2395888 | 25385325 ~ 25548928 (-) | True | si:cabz01090165.1 |
| TU126682 | other | upstream | 1757119 | 29702152 ~ 29713992 (-) | False | hipk3b |
| TU127077 | other | upstream | 2398498 | 30343531 ~ 30344876 (-) | True | G107525 |
| TU127397 | other | upstream | 2784925 | 30729958 ~ 30732031 (-) | False | bbs10 |
| TU127465 | other | upstream | 2871546 | 30816579 ~ 30819614 (-) | True | G107803 |
