Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU125776 |
| length | 222 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G106356 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 28097773 ~ 28097994 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU125726 | lncRNA | downstream | 18898 | 28038090 ~ 28078875 (-) | True | G106319 |
| TU125749 | lncRNA | downstream | 26903 | 28069599 ~ 28070870 (-) | True | G106336 |
| TU125671 | lncRNA | downstream | 129572 | 27967982 ~ 27968201 (-) | True | G106269 |
| TU125667 | lncRNA | downstream | 131522 | 27965063 ~ 27966251 (-) | True | G106265 |
| TU125666 | lncRNA | downstream | 133763 | 27963771 ~ 27964010 (-) | True | G106264 |
| XR_004578301.1 | lncRNA | upstream | 161703 | 28259697 ~ 28261304 (-) | True | LOC117597514 |
| TU126111 | lncRNA | upstream | 502125 | 28600119 ~ 28601535 (-) | True | G106653 |
| TU126113 | lncRNA | upstream | 506319 | 28604313 ~ 28605437 (-) | True | G106655 |
| TU126114 | lncRNA | upstream | 508264 | 28606258 ~ 28608041 (-) | True | G106656 |
| TU126115 | lncRNA | upstream | 510952 | 28608946 ~ 28609764 (-) | True | G106657 |
| XM_026914328.2 | mRNA | downstream | 157951 | 27925890 ~ 27939822 (-) | True | LOC113526894 |
| XM_026913761.2 | mRNA | downstream | 219154 | 27865109 ~ 27878619 (-) | True | zdhhc7 |
| XM_026913760.2 | mRNA | downstream | 219155 | 27865109 ~ 27878618 (-) | False | zdhhc7 |
| XM_026914111.2 | mRNA | downstream | 238412 | 27854836 ~ 27859361 (-) | True | cog8 |
| XM_034305151.1 | mRNA | downstream | 250951 | 27825324 ~ 27846822 (-) | True | wdr59 |
| XM_026913729.2 | mRNA | upstream | 85539 | 28183533 ~ 28205626 (-) | False | LOC113526564 |
| XM_026913728.2 | mRNA | upstream | 85539 | 28183533 ~ 28205624 (-) | True | LOC113526564 |
| XM_026913722.2 | mRNA | upstream | 131444 | 28229438 ~ 28233387 (-) | True | foxf1 |
| XM_026914417.2 | mRNA | upstream | 317141 | 28415135 ~ 28422985 (-) | True | irf8 |
| XM_026914419.2 | mRNA | upstream | 325803 | 28423797 ~ 28446913 (-) | True | dusp22a |
| TU125182 | other | downstream | 940633 | 27152312 ~ 27157140 (-) | False | si:dkey-151j17.4 |
| TU124747 | other | downstream | 1489444 | 26569085 ~ 26608329 (-) | False | LOC113526510 |
| TU124615 | other | downstream | 1856768 | 26239330 ~ 26241005 (-) | True | G105376 |
| XR_003402762.2 | other | downstream | 2548845 | 25385325 ~ 25548928 (-) | True | si:cabz01090165.1 |
| TU126682 | other | upstream | 1604158 | 29702152 ~ 29713992 (-) | False | hipk3b |
| TU127077 | other | upstream | 2245537 | 30343531 ~ 30344876 (-) | True | G107525 |
| TU127397 | other | upstream | 2631964 | 30729958 ~ 30732031 (-) | False | bbs10 |
| TU127465 | other | upstream | 2718585 | 30816579 ~ 30819614 (-) | True | G107803 |
