Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU126118 |
| length | 277 |
| lncRNA type | intronic |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G106660 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 28614267 ~ 28614543 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU126115 | lncRNA | downstream | 4503 | 28608946 ~ 28609764 (-) | True | G106657 |
| TU126114 | lncRNA | downstream | 6226 | 28606258 ~ 28608041 (-) | True | G106656 |
| TU126113 | lncRNA | downstream | 8830 | 28604313 ~ 28605437 (-) | True | G106655 |
| TU126111 | lncRNA | downstream | 12732 | 28600119 ~ 28601535 (-) | True | G106653 |
| XR_004578301.1 | lncRNA | downstream | 352963 | 28259697 ~ 28261304 (-) | True | LOC117597514 |
| TU126125 | lncRNA | upstream | 42447 | 28656990 ~ 28657189 (-) | True | G106667 |
| TU126132 | lncRNA | upstream | 72796 | 28687339 ~ 28688110 (-) | True | G106674 |
| TU126134 | lncRNA | upstream | 74912 | 28689455 ~ 28689974 (-) | True | G106676 |
| TU126136 | lncRNA | upstream | 81016 | 28695559 ~ 28697797 (-) | True | G106678 |
| TU126139 | lncRNA | upstream | 92587 | 28707130 ~ 28707742 (-) | True | G106681 |
| XM_026914421.2 | mRNA | downstream | 161952 | 28448739 ~ 28452315 (-) | True | LOC113526963 |
| XM_034305449.1 | mRNA | downstream | 167329 | 28430071 ~ 28446938 (-) | False | dusp22a |
| XM_026914419.2 | mRNA | downstream | 167354 | 28423797 ~ 28446913 (-) | True | dusp22a |
| XM_026914417.2 | mRNA | downstream | 191282 | 28415135 ~ 28422985 (-) | True | irf8 |
| XM_026913722.2 | mRNA | downstream | 380880 | 28229438 ~ 28233387 (-) | True | foxf1 |
| XM_026913748.2 | mRNA | upstream | 155082 | 28769625 ~ 28774040 (-) | False | LOC113526572 |
| XM_026913747.2 | mRNA | upstream | 155082 | 28769625 ~ 28774030 (-) | True | LOC113526572 |
| XM_026914369.2 | mRNA | upstream | 167481 | 28782024 ~ 28790810 (-) | True | atmin |
| XM_026913490.2 | mRNA | upstream | 177248 | 28791791 ~ 28799363 (-) | True | cenpn |
| XM_026913456.2 | mRNA | upstream | 193564 | 28808107 ~ 28852636 (-) | True | LOC113526432 |
| TU125182 | other | downstream | 1457127 | 27152312 ~ 27157140 (-) | False | si:dkey-151j17.4 |
| TU124747 | other | downstream | 2005938 | 26569085 ~ 26608329 (-) | False | LOC113526510 |
| TU124615 | other | downstream | 2373262 | 26239330 ~ 26241005 (-) | True | G105376 |
| XR_003402762.2 | other | downstream | 3065339 | 25385325 ~ 25548928 (-) | True | si:cabz01090165.1 |
| TU126682 | other | upstream | 1087609 | 29702152 ~ 29713992 (-) | False | hipk3b |
| TU127077 | other | upstream | 1728988 | 30343531 ~ 30344876 (-) | True | G107525 |
| TU127397 | other | upstream | 2115415 | 30729958 ~ 30732031 (-) | False | bbs10 |
| TU127465 | other | upstream | 2202036 | 30816579 ~ 30819614 (-) | True | G107803 |
