Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU126723 |
| length | 281 |
| lncRNA type | sense_over |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G107210 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 29765376 ~ 29844857 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU126702 | lncRNA | downstream | 40999 | 29724114 ~ 29724377 (-) | True | G107191 |
| TU126704 | lncRNA | downstream | 57476 | 29680263 ~ 29707900 (-) | True | G107193 |
| TU126679 | lncRNA | downstream | 87867 | 29659641 ~ 29677509 (-) | False | hipk3b |
| TU126683 | lncRNA | downstream | 103677 | 29620799 ~ 29661699 (-) | False | hipk3b |
| XR_003402809.2 | lncRNA | downstream | 485193 | 29273077 ~ 29280183 (-) | True | LOC113526826 |
| TU126731 | lncRNA | upstream | 77885 | 29922742 ~ 29923193 (-) | True | G107217 |
| TU127060 | lncRNA | upstream | 464990 | 30309847 ~ 30311846 (-) | True | G107510 |
| TU127084 | lncRNA | upstream | 518770 | 30363627 ~ 30391458 (-) | True | G107532 |
| TU127085 | lncRNA | upstream | 523481 | 30368338 ~ 30369188 (-) | True | G107533 |
| TU127088 | lncRNA | upstream | 524030 | 30368887 ~ 30406964 (-) | True | G107536 |
| XM_034305475.1 | mRNA | downstream | 51375 | 29668907 ~ 29714001 (-) | True | hipk3b |
| XM_026913638.2 | mRNA | downstream | 107567 | 29599585 ~ 29657809 (-) | True | kiaa1549lb |
| XM_026914401.2 | mRNA | downstream | 285944 | 29398604 ~ 29479432 (-) | True | spon1a |
| XM_026913423.2 | mRNA | downstream | 395825 | 29345335 ~ 29369551 (-) | True | syt9a |
| XM_026913923.2 | mRNA | downstream | 434426 | 29294889 ~ 29330950 (-) | False | ppfibp2a |
| XM_026913330.2 | mRNA | upstream | 126610 | 29971467 ~ 30064366 (-) | True | luzp2 |
| XM_026914460.2 | mRNA | upstream | 292154 | 30137011 ~ 30256084 (-) | False | tspan4a |
| XM_026914459.2 | mRNA | upstream | 292154 | 30137011 ~ 30222358 (-) | True | tspan4a |
| XM_026914034.2 | mRNA | upstream | 510664 | 30355521 ~ 30359530 (-) | True | tnni1c |
| XM_034304953.1 | mRNA | upstream | 582323 | 30427180 ~ 30433055 (-) | True | miox |
| TU126682 | other | downstream | 51384 | 29702152 ~ 29713992 (-) | False | hipk3b |
| TU125182 | other | downstream | 2608236 | 27152312 ~ 27157140 (-) | False | si:dkey-151j17.4 |
| TU124747 | other | downstream | 3157047 | 26569085 ~ 26608329 (-) | False | LOC113526510 |
| TU124615 | other | downstream | 3524371 | 26239330 ~ 26241005 (-) | True | G105376 |
| XR_003402764.2 | other | downstream | 4280255 | 25385325 ~ 25485121 (-) | False | si:cabz01090165.1 |
| TU127077 | other | upstream | 498674 | 30343531 ~ 30344876 (-) | True | G107525 |
| TU127397 | other | upstream | 885101 | 30729958 ~ 30732031 (-) | False | bbs10 |
| TU127465 | other | upstream | 971722 | 30816579 ~ 30819614 (-) | True | G107803 |
