Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU127470 |
| length | 768 |
| lncRNA type | read_through |
| GC content | 0.60 |
| exon number | 3 |
| gene id | G107806 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 30835634 ~ 30884613 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU127468 | lncRNA | downstream | 5981 | 30828151 ~ 30829653 (-) | True | G107805 |
| TU127460 | lncRNA | downstream | 9547 | 30811047 ~ 30826087 (-) | True | G107800 |
| TU127466 | lncRNA | downstream | 13277 | 30820709 ~ 30822357 (-) | True | G107804 |
| TU127464 | lncRNA | downstream | 15212 | 30819206 ~ 30820422 (-) | False | G107803 |
| XR_003402799.2 | lncRNA | downstream | 120181 | 30714118 ~ 30715453 (-) | True | LOC113526678 |
| XR_004578353.1 | lncRNA | upstream | 15952 | 30900565 ~ 30908021 (-) | True | LOC117597590 |
| TU127479 | lncRNA | upstream | 34571 | 30919184 ~ 30989204 (-) | False | LOC113524890 |
| TU127503 | lncRNA | upstream | 111660 | 30996273 ~ 30998215 (-) | False | LOC117597523 |
| TU127506 | lncRNA | upstream | 111660 | 30996273 ~ 30999390 (-) | False | LOC117597523 |
| TU127507 | lncRNA | upstream | 111660 | 30996273 ~ 30998215 (-) | False | LOC117597523 |
| XM_034305116.1 | mRNA | downstream | 31138 | 30792940 ~ 30804496 (-) | True | si:dkey-30c15.2 |
| XM_026913544.2 | mRNA | downstream | 75455 | 30756449 ~ 30760179 (-) | True | pdp2 |
| XM_034304940.1 | mRNA | downstream | 80544 | 30740467 ~ 30755090 (-) | False | si:dkey-30c15.10 |
| XM_034305388.1 | mRNA | upstream | 34572 | 30919185 ~ 30930200 (-) | True | LOC113524890 |
| XM_034305068.1 | mRNA | upstream | 76750 | 30961363 ~ 30967101 (-) | False | gemin7 |
| XM_034305066.1 | mRNA | upstream | 76750 | 30961363 ~ 30967020 (-) | False | gemin7 |
| XM_034305069.1 | mRNA | upstream | 76750 | 30961363 ~ 30966975 (-) | True | gemin7 |
| XM_034305067.1 | mRNA | upstream | 76753 | 30961366 ~ 30967129 (-) | False | gemin7 |
| TU127465 | other | downstream | 16020 | 30816579 ~ 30819614 (-) | True | G107803 |
| TU127397 | other | downstream | 103603 | 30729958 ~ 30732031 (-) | False | bbs10 |
| TU127077 | other | downstream | 490758 | 30343531 ~ 30344876 (-) | True | G107525 |
| TU126682 | other | downstream | 1121642 | 29702152 ~ 29713992 (-) | False | hipk3b |
| TU125182 | other | downstream | 3678494 | 27152312 ~ 27157140 (-) | False | si:dkey-151j17.4 |
