Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026914031.2 |
| length | 735 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | aamdc |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 23297355 ~ 23299010 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0043066 | negative regulation of apoptotic process | biological_process |
| GO:0045944 | positive regulation of transcription by RNA polymerase II | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU122712 | lncRNA | downstream | 22073 | 23270144 ~ 23275282 (-) | True | G103702 |
| TU122600 | lncRNA | downstream | 34272 | 23262807 ~ 23263083 (-) | True | G103600 |
| TU122573 | lncRNA | downstream | 38167 | 23219022 ~ 23259188 (-) | True | G103576 |
| TU122418 | lncRNA | downstream | 361309 | 22928169 ~ 22936046 (-) | True | G103436 |
| TU122387 | lncRNA | downstream | 414202 | 22865924 ~ 22883153 (-) | True | G103410 |
| TU122733 | lncRNA | upstream | 22653 | 23321663 ~ 23323412 (-) | True | G103719 |
| TU122741 | lncRNA | upstream | 30666 | 23329676 ~ 23330101 (-) | True | G103727 |
| TU122845 | lncRNA | upstream | 213147 | 23512157 ~ 23513328 (-) | True | G103817 |
| TU122848 | lncRNA | upstream | 273579 | 23572589 ~ 23575679 (-) | True | G103820 |
| TU123026 | lncRNA | upstream | 349674 | 23648684 ~ 23699689 (-) | False | rnpepl1 |
| XM_026914213.2 | mRNA | downstream | 135046 | 23158732 ~ 23162309 (-) | True | LOC113526825 |
| XM_026914311.2 | mRNA | downstream | 143706 | 23150108 ~ 23153649 (-) | True | LOC113526884 |
| XM_026913500.2 | mRNA | downstream | 955914 | 22336760 ~ 22341441 (-) | True | slitrk3a |
| XM_034305154.1 | mRNA | downstream | 990586 | 22231448 ~ 22306769 (-) | True | si |
| XM_026913317.2 | mRNA | downstream | 1633028 | 21641638 ~ 21664327 (-) | True | serpini1 |
| XM_026913338.2 | mRNA | upstream | 35167 | 23334177 ~ 23340381 (-) | True | aqp11 |
| XM_034305528.1 | mRNA | upstream | 156683 | 23455693 ~ 23504297 (-) | False | myo7aa |
| XM_034305527.1 | mRNA | upstream | 156683 | 23455693 ~ 23498506 (-) | False | myo7aa |
| XM_034305526.1 | mRNA | upstream | 156683 | 23455693 ~ 23498506 (-) | True | myo7aa |
| XM_026913998.2 | mRNA | upstream | 214383 | 23513393 ~ 23535680 (-) | True | capn5a |
| XR_004578321.1 | other | downstream | 990586 | 22234703 ~ 22306769 (-) | False | si |
| XR_004578325.1 | other | downstream | 2284255 | 20995341 ~ 21013100 (-) | False | sertad3 |
| TU121422 | other | downstream | 2330445 | 20953602 ~ 20966910 (-) | True | G102566 |
| XR_003402829.1 | other | downstream | 3317096 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| XR_003402833.1 | other | downstream | 3946412 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| XR_004578330.1 | other | upstream | 291935 | 23590945 ~ 23610448 (-) | True | mmp23bb |
| TU123617 | other | upstream | 1324506 | 24623516 ~ 24711368 (-) | True | G104473 |
| XR_003402792.2 | other | upstream | 1453602 | 24752612 ~ 24762781 (-) | False | clasrp |
| XR_003402763.2 | other | upstream | 2086315 | 25385325 ~ 25548928 (-) | False | si:cabz01090165.1 |
| XR_003402762.2 | other | upstream | 2086315 | 25385325 ~ 25548928 (-) | True | si:cabz01090165.1 |
