Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003402778.1 |
| length | 253 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 3 |
| gene id | LOC113526487 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 27188342 ~ 27188792 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004578372.1 | lncRNA | downstream | 43468 | 27143707 ~ 27144874 (-) | True | LOC117597606 |
| TU125118 | lncRNA | downstream | 59170 | 27123277 ~ 27129172 (-) | True | G105842 |
| TU125109 | lncRNA | downstream | 80771 | 27105368 ~ 27107571 (-) | True | G105835 |
| TU124929 | lncRNA | downstream | 312508 | 26875595 ~ 26875834 (-) | True | G105666 |
| TU124902 | lncRNA | downstream | 368625 | 26819466 ~ 26819717 (-) | True | G105639 |
| TU125590 | lncRNA | upstream | 590340 | 27779132 ~ 27781800 (-) | True | G106193 |
| TU125592 | lncRNA | upstream | 673048 | 27861840 ~ 27905029 (-) | True | G106195 |
| TU125660 | lncRNA | upstream | 756024 | 27944816 ~ 27945033 (-) | True | G106258 |
| TU125661 | lncRNA | upstream | 764726 | 27953518 ~ 27953990 (-) | True | G106259 |
| TU125662 | lncRNA | upstream | 765472 | 27954264 ~ 27954479 (-) | True | G106260 |
| XM_034304984.1 | mRNA | downstream | 2305 | 27175267 ~ 27186037 (-) | True | LOC113526685 |
| XM_034304983.1 | mRNA | downstream | 28243 | 27144888 ~ 27160099 (-) | True | si:dkey-151j17.4 |
| XM_034305079.1 | mRNA | downstream | 44747 | 27138247 ~ 27143595 (-) | True | LOC117597534 |
| XM_034304982.1 | mRNA | downstream | 50004 | 27132129 ~ 27138338 (-) | True | LOC113526953 |
| XM_026913390.2 | mRNA | downstream | 340379 | 26827024 ~ 26847963 (-) | True | pkma |
| XM_026913304.2 | mRNA | upstream | 5127 | 27193919 ~ 27202055 (-) | True | LOC113526349 |
| XM_034305032.1 | mRNA | upstream | 14975 | 27203767 ~ 27297171 (-) | False | LOC113526686 |
| XM_034305048.1 | mRNA | upstream | 14975 | 27203767 ~ 27294632 (-) | False | LOC113526686 |
| XM_034305046.1 | mRNA | upstream | 14975 | 27203767 ~ 27294632 (-) | False | LOC113526686 |
| XM_034305037.1 | mRNA | upstream | 14975 | 27203767 ~ 27294632 (-) | False | LOC113526686 |
| TU125182 | other | downstream | 31202 | 27152312 ~ 27157140 (-) | False | si:dkey-151j17.4 |
| TU124747 | other | downstream | 580013 | 26569085 ~ 26608329 (-) | False | LOC113526510 |
| TU124615 | other | downstream | 947337 | 26239330 ~ 26241005 (-) | True | G105376 |
| XR_003402763.2 | other | downstream | 1639414 | 25385325 ~ 25548928 (-) | False | si:cabz01090165.1 |
| TU126682 | other | upstream | 2513360 | 29702152 ~ 29713992 (-) | False | hipk3b |
| TU127077 | other | upstream | 3154739 | 30343531 ~ 30344876 (-) | True | G107525 |
| TU127397 | other | upstream | 3541166 | 30729958 ~ 30732031 (-) | False | bbs10 |
| TU127465 | other | upstream | 3627787 | 30816579 ~ 30819614 (-) | True | G107803 |
