Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003402799.2 |
| length | 325 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | LOC113526678 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 30714118 ~ 30715453 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU127103 | lncRNA | downstream | 244215 | 30443523 ~ 30469903 (-) | True | G107550 |
| TU127127 | lncRNA | downstream | 290780 | 30421252 ~ 30423338 (-) | True | G107574 |
| TU127088 | lncRNA | downstream | 307154 | 30368887 ~ 30406964 (-) | True | G107536 |
| TU127084 | lncRNA | downstream | 322660 | 30363627 ~ 30391458 (-) | True | G107532 |
| TU127085 | lncRNA | downstream | 344930 | 30368338 ~ 30369188 (-) | True | G107533 |
| TU127459 | lncRNA | upstream | 70140 | 30785593 ~ 30849684 (-) | False | selenot1b |
| TU127460 | lncRNA | upstream | 95594 | 30811047 ~ 30826087 (-) | True | G107800 |
| TU127464 | lncRNA | upstream | 103753 | 30819206 ~ 30820422 (-) | False | G107803 |
| TU127466 | lncRNA | upstream | 105256 | 30820709 ~ 30822357 (-) | True | G107804 |
| TU127468 | lncRNA | upstream | 112698 | 30828151 ~ 30829653 (-) | True | G107805 |
| XM_026913535.2 | mRNA | downstream | 3395 | 30700440 ~ 30710723 (-) | True | caps2 |
| XM_026914118.2 | mRNA | downstream | 88785 | 30614083 ~ 30625333 (-) | False | cd9a |
| XM_026914119.2 | mRNA | downstream | 90931 | 30614083 ~ 30623187 (-) | True | cd9a |
| XM_026914120.2 | mRNA | downstream | 91109 | 30614083 ~ 30623009 (-) | False | cd9a |
| XM_026914231.2 | mRNA | downstream | 104911 | 30604089 ~ 30609207 (-) | True | si:dkey-88e18.8 |
| XM_026913941.2 | mRNA | upstream | 12591 | 30728044 ~ 30732059 (-) | True | bbs10 |
| XM_034304940.1 | mRNA | upstream | 25014 | 30740467 ~ 30755090 (-) | False | si:dkey-30c15.10 |
| XM_034304939.1 | mRNA | upstream | 25014 | 30740467 ~ 30755090 (-) | False | si:dkey-30c15.10 |
| XM_034304938.1 | mRNA | upstream | 25014 | 30740467 ~ 30755090 (-) | True | si:dkey-30c15.10 |
| XM_026913544.2 | mRNA | upstream | 40996 | 30756449 ~ 30760179 (-) | True | pdp2 |
| TU127077 | other | downstream | 369242 | 30343531 ~ 30344876 (-) | True | G107525 |
| TU126682 | other | downstream | 1000126 | 29702152 ~ 29713992 (-) | False | hipk3b |
| TU125182 | other | downstream | 3556978 | 27152312 ~ 27157140 (-) | False | si:dkey-151j17.4 |
| TU124747 | other | downstream | 4105789 | 26569085 ~ 26608329 (-) | False | LOC113526510 |
| TU124615 | other | downstream | 4473113 | 26239330 ~ 26241005 (-) | True | G105376 |
| TU127397 | other | upstream | 14505 | 30729958 ~ 30732031 (-) | False | bbs10 |
| TU127465 | other | upstream | 101126 | 30816579 ~ 30819614 (-) | True | G107803 |
