Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003402809.2 |
| length | 1209 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 4 |
| gene id | LOC113526826 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 29273077 ~ 29280183 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU126422 | lncRNA | downstream | 70233 | 29202007 ~ 29202844 (-) | True | G106951 |
| TU126243 | lncRNA | downstream | 467647 | 28805033 ~ 28805430 (-) | True | G106772 |
| TU126180 | lncRNA | downstream | 494059 | 28764739 ~ 28779018 (-) | True | G106713 |
| TU126166 | lncRNA | downstream | 511340 | 28761518 ~ 28761737 (-) | True | G106705 |
| TU126140 | lncRNA | downstream | 563507 | 28707899 ~ 28709570 (-) | True | G106682 |
| TU126683 | lncRNA | upstream | 340616 | 29620799 ~ 29661699 (-) | False | hipk3b |
| TU126679 | lncRNA | upstream | 379458 | 29659641 ~ 29677509 (-) | False | hipk3b |
| TU126704 | lncRNA | upstream | 400080 | 29680263 ~ 29707900 (-) | True | G107193 |
| TU126702 | lncRNA | upstream | 443931 | 29724114 ~ 29724377 (-) | True | G107191 |
| TU126723 | lncRNA | upstream | 485193 | 29765376 ~ 29844857 (-) | True | G107210 |
| XM_026914399.2 | mRNA | downstream | 67634 | 29192381 ~ 29205443 (-) | True | mafa |
| XM_026913456.2 | mRNA | downstream | 420441 | 28808107 ~ 28852636 (-) | True | LOC113526432 |
| XM_034304966.1 | mRNA | downstream | 449247 | 28808107 ~ 28823830 (-) | False | LOC113526432 |
| XM_026913490.2 | mRNA | downstream | 473714 | 28791791 ~ 28799363 (-) | True | cenpn |
| XM_026914369.2 | mRNA | downstream | 482267 | 28782024 ~ 28790810 (-) | True | atmin |
| XM_026913922.2 | mRNA | upstream | 14703 | 29294886 ~ 29330953 (-) | False | ppfibp2a |
| XM_026913921.2 | mRNA | upstream | 14704 | 29294887 ~ 29330953 (-) | True | ppfibp2a |
| XM_026913924.2 | mRNA | upstream | 14704 | 29294887 ~ 29326294 (-) | False | ppfibp2a |
| XM_026913926.2 | mRNA | upstream | 14705 | 29294888 ~ 29330951 (-) | False | ppfibp2a |
| XM_026913927.2 | mRNA | upstream | 14706 | 29294889 ~ 29330950 (-) | False | ppfibp2a |
| TU125182 | other | downstream | 2115937 | 27152312 ~ 27157140 (-) | False | si:dkey-151j17.4 |
| TU124747 | other | downstream | 2664748 | 26569085 ~ 26608329 (-) | False | LOC113526510 |
| TU124615 | other | downstream | 3032072 | 26239330 ~ 26241005 (-) | True | G105376 |
| XR_003402762.2 | other | downstream | 3724149 | 25385325 ~ 25548928 (-) | True | si:cabz01090165.1 |
| TU126682 | other | upstream | 421969 | 29702152 ~ 29713992 (-) | False | hipk3b |
| TU127077 | other | upstream | 1063348 | 30343531 ~ 30344876 (-) | True | G107525 |
| TU127397 | other | upstream | 1449775 | 30729958 ~ 30732031 (-) | False | bbs10 |
| TU127465 | other | upstream | 1536396 | 30816579 ~ 30819614 (-) | True | G107803 |
