Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnam-cau_19 |
| length | 73 |
| RNA type | tRNA |
| GC content | 0.56 |
| exon number | 1 |
| gene id | trnam-cau_19 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 6194075 ~ 6194147 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU112372 | lncRNA | downstream | 163400 | 6029309 ~ 6030675 (-) | True | G94608 |
| TU112371 | lncRNA | downstream | 164840 | 6025360 ~ 6029235 (-) | True | G94607 |
| XR_004578356.1 | lncRNA | downstream | 280482 | 5911768 ~ 5913593 (-) | True | LOC117597596 |
| TU112144 | lncRNA | downstream | 407644 | 5713843 ~ 5786431 (-) | False | LOC113534829 |
| TU112194 | lncRNA | downstream | 490284 | 5703581 ~ 5703791 (-) | True | G94441 |
| TU112506 | lncRNA | upstream | 36709 | 6230856 ~ 6231165 (-) | True | G94728 |
| TU112508 | lncRNA | upstream | 38858 | 6233005 ~ 6233239 (-) | True | G94730 |
| TU112510 | lncRNA | upstream | 44534 | 6238681 ~ 6239748 (-) | True | G94732 |
| TU112511 | lncRNA | upstream | 46054 | 6240201 ~ 6240526 (-) | True | G94733 |
| TU112512 | lncRNA | upstream | 46470 | 6240617 ~ 6242160 (-) | True | G94734 |
| XM_026927517.2 | mRNA | downstream | 22956 | 6048476 ~ 6171119 (-) | False | gramd1bb |
| XM_026927518.2 | mRNA | downstream | 22956 | 6048476 ~ 6171119 (-) | False | gramd1bb |
| XM_026927515.2 | mRNA | downstream | 22956 | 6048476 ~ 6171119 (-) | True | gramd1bb |
| XM_026927522.2 | mRNA | downstream | 22957 | 6048476 ~ 6171118 (-) | False | gramd1bb |
| XM_026927521.2 | mRNA | downstream | 22957 | 6048476 ~ 6171118 (-) | False | gramd1bb |
| XM_026927437.2 | mRNA | upstream | 3096 | 6197243 ~ 6281530 (-) | True | clmpb |
| XM_026927410.2 | mRNA | upstream | 282805 | 6476952 ~ 6680208 (-) | True | kirrel3b |
| XM_034305150.1 | mRNA | upstream | 798989 | 6993136 ~ 7035230 (-) | False | ets1 |
| XM_026927119.2 | mRNA | upstream | 798989 | 6993136 ~ 7032742 (-) | False | ets1 |
| XM_026927120.2 | mRNA | upstream | 798989 | 6993136 ~ 7017324 (-) | True | ets1 |
| XR_004578382.1 | other | downstream | 1701336 | 4492546 ~ 4492739 (-) | True | LOC117597618 |
| TU111361 | other | downstream | 2020481 | 4173288 ~ 4173594 (-) | True | G93711 |
| XR_004578380.1 | other | downstream | 2662384 | 3429028 ~ 3531691 (-) | False | kcnab1a |
| TU110621 | other | downstream | 3425777 | 2759612 ~ 2768298 (-) | True | G93047 |
| TU110620 | other | downstream | 3442906 | 2749388 ~ 2751169 (-) | True | G93046 |
| trnap-agg | other | upstream | 671121 | 6865268 ~ 6865339 (-) | True | trnap-agg |
| XR_003403498.2 | other | upstream | 953797 | 7147944 ~ 7157488 (-) | False | LOC113534453 |
| XR_003403522.2 | other | upstream | 1248226 | 7442373 ~ 7614096 (-) | False | shank3a |
| TU114125 | other | upstream | 2274154 | 8468301 ~ 8478236 (-) | False | LOC113534821 |
| XR_004578315.1 | other | upstream | 4074330 | 10268477 ~ 10294823 (-) | False | ttc38 |
