Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU155919 |
| length | 233 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G131972 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 13392525 ~ 13400280 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU155912 | lncRNA | upstream | 24349 | 13365880 ~ 13368176 (+) | True | G131968 |
| TU155905 | lncRNA | upstream | 66812 | 13325504 ~ 13325713 (+) | True | G131962 |
| TU155899 | lncRNA | upstream | 75019 | 13317298 ~ 13317506 (+) | True | G131956 |
| TU155897 | lncRNA | upstream | 76862 | 13315443 ~ 13315663 (+) | True | G131954 |
| TU155870 | lncRNA | upstream | 117430 | 13274135 ~ 13275095 (+) | True | G131930 |
| TU155931 | lncRNA | downstream | 20425 | 13420705 ~ 13422214 (+) | True | G131980 |
| TU155938 | lncRNA | downstream | 33637 | 13433917 ~ 13435294 (+) | True | G131987 |
| TU155891 | lncRNA | downstream | 35221 | 13435501 ~ 13436958 (+) | True | G131948 |
| TU155890 | lncRNA | downstream | 37642 | 13437922 ~ 13439730 (+) | True | G131947 |
| TU156048 | lncRNA | downstream | 100109 | 13500389 ~ 13500683 (+) | True | G132081 |
| XM_034306953.1 | mRNA | upstream | 6140 | 13372492 ~ 13386385 (+) | True | tpd52l2a |
| XM_026926458.2 | mRNA | upstream | 6140 | 13372492 ~ 13386385 (+) | False | tpd52l2a |
| XM_034306954.1 | mRNA | upstream | 6140 | 13372492 ~ 13386385 (+) | False | tpd52l2a |
| XM_026926468.2 | mRNA | upstream | 6140 | 13372492 ~ 13386385 (+) | False | tpd52l2a |
| XM_034306955.1 | mRNA | upstream | 6140 | 13372492 ~ 13386385 (+) | False | tpd52l2a |
| XM_026912780.2 | mRNA | downstream | 63851 | 13464131 ~ 13489999 (+) | True | si:dkey-70p6.1 |
| XM_026912789.2 | mRNA | downstream | 63851 | 13464131 ~ 13489999 (+) | False | si:dkey-70p6.1 |
| XM_034306380.1 | mRNA | downstream | 123441 | 13523721 ~ 13541674 (+) | False | emilin3a |
| XM_026924721.2 | mRNA | downstream | 137131 | 13537411 ~ 13541674 (+) | True | emilin3a |
| XM_026913672.2 | mRNA | downstream | 216324 | 13616604 ~ 13685739 (+) | False | magixa |
| trnae-cuc_18 | other | upstream | 22906 | 13369548 ~ 13369619 (+) | True | trnae-cuc_18 |
| trnaf-gaa_25 | other | upstream | 328403 | 13064050 ~ 13064122 (+) | True | trnaf-gaa_25 |
| trnav-cac_9 | other | upstream | 330517 | 13061936 ~ 13062008 (+) | True | trnav-cac_9 |
| trnad-guc_1 | other | upstream | 1010455 | 12381999 ~ 12382070 (+) | True | trnad-guc_1 |
| TU154763 | other | upstream | 1681980 | 11709454 ~ 11710545 (+) | False | porcn |
| TU156117 | other | downstream | 304976 | 13705256 ~ 13707550 (+) | False | LOC113527348 |
| TU156645 | other | downstream | 921892 | 14322172 ~ 14323450 (+) | True | G132595 |
| trnae-cuc_19 | other | downstream | 1579553 | 14979833 ~ 14979904 (+) | True | trnae-cuc_19 |
| TU157849 | other | downstream | 2601781 | 16002061 ~ 16011604 (+) | False | G133631 |
| TU157866 | other | downstream | 2601781 | 16002061 ~ 16018783 (+) | True | G133631 |
