Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU156117 |
| length | 498 |
| RNA type | TUCP |
| GC content | 0.59 |
| exon number | 2 |
| gene id | LOC113527348 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 13705166 ~ 13791317 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU156088 | lncRNA | upstream | 134284 | 13570392 ~ 13570972 (+) | True | G132115 |
| TU156048 | lncRNA | upstream | 204573 | 13500389 ~ 13500683 (+) | True | G132081 |
| TU155890 | lncRNA | upstream | 265526 | 13437922 ~ 13439730 (+) | True | G131947 |
| TU155891 | lncRNA | upstream | 268298 | 13435501 ~ 13436958 (+) | True | G131948 |
| TU155938 | lncRNA | upstream | 269962 | 13433917 ~ 13435294 (+) | True | G131987 |
| TU156119 | lncRNA | downstream | 82921 | 13790471 ~ 13791279 (+) | False | LOC113527348 |
| TU156121 | lncRNA | downstream | 84312 | 13791862 ~ 13792709 (+) | True | G132139 |
| TU156118 | lncRNA | downstream | 85606 | 13793156 ~ 13794305 (+) | True | G132136 |
| TU156120 | lncRNA | downstream | 87032 | 13794582 ~ 13799616 (+) | True | G132138 |
| TU156341 | lncRNA | downstream | 183660 | 13891210 ~ 13948808 (+) | False | dock8 |
| XM_026913655.2 | mRNA | upstream | 16327 | 13616607 ~ 13688929 (+) | False | magixa |
| XM_026913646.2 | mRNA | upstream | 16327 | 13616608 ~ 13688929 (+) | True | magixa |
| XM_026913672.2 | mRNA | upstream | 19517 | 13616604 ~ 13685739 (+) | False | magixa |
| XM_034306380.1 | mRNA | upstream | 163582 | 13523721 ~ 13541674 (+) | False | emilin3a |
| XM_026924721.2 | mRNA | upstream | 163582 | 13537411 ~ 13541674 (+) | True | emilin3a |
| XM_026915087.2 | mRNA | downstream | 48954 | 13756504 ~ 13790276 (+) | False | LOC113527348 |
| XM_026930414.2 | mRNA | downstream | 115548 | 13823098 ~ 13833297 (+) | False | porcnl |
| XM_026930443.2 | mRNA | downstream | 115548 | 13823098 ~ 13833297 (+) | False | porcnl |
| XM_034306245.1 | mRNA | downstream | 115548 | 13823098 ~ 13833297 (+) | False | porcnl |
| XM_026930423.2 | mRNA | downstream | 115800 | 13823350 ~ 13833297 (+) | True | porcnl |
| trnae-cuc_18 | other | upstream | 335637 | 13369548 ~ 13369619 (+) | True | trnae-cuc_18 |
| trnaf-gaa_25 | other | upstream | 641134 | 13064050 ~ 13064122 (+) | True | trnaf-gaa_25 |
| trnav-cac_9 | other | upstream | 643248 | 13061936 ~ 13062008 (+) | True | trnav-cac_9 |
| trnad-guc_1 | other | upstream | 1323186 | 12381999 ~ 12382070 (+) | True | trnad-guc_1 |
| TU154763 | other | upstream | 1994711 | 11709454 ~ 11710545 (+) | False | porcn |
| TU156645 | other | downstream | 614622 | 14322172 ~ 14323450 (+) | True | G132595 |
| trnae-cuc_19 | other | downstream | 1272283 | 14979833 ~ 14979904 (+) | True | trnae-cuc_19 |
| TU157849 | other | downstream | 2294511 | 16002061 ~ 16011604 (+) | False | G133631 |
| TU157866 | other | downstream | 2294511 | 16002061 ~ 16018783 (+) | True | G133631 |
| XR_004578524.1 | other | downstream | 2695198 | 16402748 ~ 16419509 (+) | False | si:ch211-166a6.5 |
