Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU157332 |
| length | 332 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G133220 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 15209515 ~ 15209846 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008430 | selenium binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU157181 | lncRNA | upstream | 226642 | 14943077 ~ 14982873 (+) | False | commd10 |
| TU157035 | lncRNA | upstream | 385152 | 14821982 ~ 14824363 (+) | True | G132968 |
| TU157022 | lncRNA | upstream | 465369 | 14742482 ~ 14744146 (+) | True | G132959 |
| XR_003403098.2 | lncRNA | upstream | 468553 | 14722430 ~ 14740962 (+) | True | LOC113529916 |
| XR_004578523.1 | lncRNA | upstream | 725779 | 14474642 ~ 14483736 (+) | True | LOC117597773 |
| TU157377 | lncRNA | downstream | 89338 | 15299184 ~ 15299387 (+) | True | G133260 |
| TU157435 | lncRNA | downstream | 133908 | 15343754 ~ 15344031 (+) | True | G133306 |
| TU157456 | lncRNA | downstream | 144615 | 15354461 ~ 15363971 (+) | True | G133307 |
| TU157467 | lncRNA | downstream | 169116 | 15378962 ~ 15384824 (+) | True | srp19 |
| TU157491 | lncRNA | downstream | 191600 | 15401446 ~ 15401762 (+) | True | G133330 |
| XM_026921965.2 | mRNA | upstream | 433 | 15195053 ~ 15209082 (+) | True | snx2 |
| XM_026921973.2 | mRNA | upstream | 433 | 15195055 ~ 15209082 (+) | False | snx2 |
| XM_026929214.2 | mRNA | upstream | 34793 | 15165645 ~ 15174722 (+) | True | sncaip |
| XM_034306381.1 | mRNA | upstream | 46155 | 15156839 ~ 15163360 (+) | True | LOC113532232 |
| XM_034306823.1 | mRNA | upstream | 62093 | 15135686 ~ 15147422 (+) | True | prr16 |
| XM_034306361.1 | mRNA | downstream | 37092 | 15246938 ~ 15276940 (+) | False | prdm6 |
| XM_026947639.2 | mRNA | downstream | 37093 | 15246939 ~ 15276878 (+) | False | prdm6 |
| XM_026947559.2 | mRNA | downstream | 37093 | 15246939 ~ 15271705 (+) | False | prdm6 |
| XM_026947487.2 | mRNA | downstream | 37100 | 15246946 ~ 15272805 (+) | True | prdm6 |
| XM_034306509.1 | mRNA | downstream | 141380 | 15351226 ~ 15357477 (+) | True | LOC117595717 |
| trnae-cuc_19 | other | upstream | 229611 | 14979833 ~ 14979904 (+) | True | trnae-cuc_19 |
| TU156645 | other | upstream | 886065 | 14322172 ~ 14323450 (+) | True | G132595 |
| TU156117 | other | upstream | 1501965 | 13705256 ~ 13707550 (+) | False | LOC113527348 |
| trnae-cuc_18 | other | upstream | 1839896 | 13369548 ~ 13369619 (+) | True | trnae-cuc_18 |
| trnaf-gaa_25 | other | upstream | 2145393 | 13064050 ~ 13064122 (+) | True | trnaf-gaa_25 |
| TU157849 | other | downstream | 792215 | 16002061 ~ 16011604 (+) | False | G133631 |
| TU157866 | other | downstream | 792215 | 16002061 ~ 16018783 (+) | True | G133631 |
| XR_004578524.1 | other | downstream | 1192902 | 16402748 ~ 16419509 (+) | False | si:ch211-166a6.5 |
| TU158258 | other | downstream | 1370411 | 16580257 ~ 16594403 (+) | False | mtmr3 |
| TU158254 | other | downstream | 1370607 | 16580453 ~ 16594403 (+) | False | mtmr3 |
