Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU157849 |
| length | 1290 |
| RNA type | TUCP |
| GC content | 0.40 |
| exon number | 3 |
| gene id | G133631 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 16002061 ~ 16018818 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU157835 | lncRNA | upstream | 29952 | 15971860 ~ 15972109 (+) | True | G133617 |
| XR_004578565.1 | lncRNA | upstream | 361103 | 15630453 ~ 15640958 (+) | True | LOC117597798 |
| XR_004578566.1 | lncRNA | upstream | 361103 | 15637918 ~ 15640958 (+) | False | LOC117597798 |
| TU157574 | lncRNA | upstream | 395722 | 15597408 ~ 15606339 (+) | True | G133386 |
| TU157510 | lncRNA | upstream | 575689 | 15425189 ~ 15426372 (+) | True | G133342 |
| TU157862 | lncRNA | downstream | 170 | 16011774 ~ 16018818 (+) | False | G133631 |
| TU157869 | lncRNA | downstream | 170 | 16011774 ~ 16018783 (+) | False | G133631 |
| TU157873 | lncRNA | downstream | 31236 | 16042840 ~ 16043039 (+) | True | G133635 |
| TU157977 | lncRNA | downstream | 153082 | 16164686 ~ 16170597 (+) | True | G133721 |
| TU157979 | lncRNA | downstream | 159581 | 16171185 ~ 16171500 (+) | True | G133722 |
| XM_026926150.2 | mRNA | upstream | 74415 | 15923290 ~ 15927646 (+) | True | znf367 |
| XM_034306763.1 | mRNA | upstream | 82049 | 15907529 ~ 15920012 (+) | True | cdc14b |
| XM_026921411.2 | mRNA | upstream | 82049 | 15907530 ~ 15920012 (+) | False | cdc14b |
| XM_026921429.2 | mRNA | upstream | 82049 | 15907531 ~ 15920012 (+) | False | cdc14b |
| XM_026921437.2 | mRNA | upstream | 82049 | 15907533 ~ 15920012 (+) | False | cdc14b |
| XM_026928384.2 | mRNA | downstream | 12768 | 16024372 ~ 16029359 (+) | False | znf366 |
| XM_026928393.2 | mRNA | downstream | 12878 | 16024482 ~ 16029359 (+) | True | znf366 |
| XM_026928403.2 | mRNA | downstream | 13467 | 16025071 ~ 16029359 (+) | False | znf366 |
| XM_026927175.2 | mRNA | downstream | 22898 | 16034502 ~ 16042147 (+) | True | mrps27 |
| XM_026930126.2 | mRNA | downstream | 43316 | 16054920 ~ 16059663 (+) | True | ptger4a |
| trnae-cuc_19 | other | upstream | 1022157 | 14979833 ~ 14979904 (+) | True | trnae-cuc_19 |
| TU156645 | other | upstream | 1678611 | 14322172 ~ 14323450 (+) | True | G132595 |
| TU156117 | other | upstream | 2294511 | 13705256 ~ 13707550 (+) | False | LOC113527348 |
| trnae-cuc_18 | other | upstream | 2632442 | 13369548 ~ 13369619 (+) | True | trnae-cuc_18 |
| trnaf-gaa_25 | other | upstream | 2937939 | 13064050 ~ 13064122 (+) | True | trnaf-gaa_25 |
| XR_004578524.1 | other | downstream | 391144 | 16402748 ~ 16419509 (+) | False | si:ch211-166a6.5 |
| TU158258 | other | downstream | 568653 | 16580257 ~ 16594403 (+) | False | mtmr3 |
| TU158254 | other | downstream | 568849 | 16580453 ~ 16594403 (+) | False | mtmr3 |
| TU158256 | other | downstream | 568849 | 16580453 ~ 16594403 (+) | False | mtmr3 |
| TU158261 | other | downstream | 568849 | 16580453 ~ 16600585 (+) | False | mtmr3 |
