Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU206042 |
| length | 218 |
| lncRNA type | read_through |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G174054 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 506782 ~ 519973 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU205619 | lncRNA | downstream | 50597 | 455864 ~ 456185 (-) | True | G173685 |
| TU205566 | lncRNA | downstream | 240244 | 263184 ~ 266538 (-) | True | G173639 |
| TU205512 | lncRNA | downstream | 291321 | 155542 ~ 215461 (-) | True | G173586 |
| TU206069 | lncRNA | upstream | 48440 | 568413 ~ 569242 (-) | True | G174074 |
| TU206125 | lncRNA | upstream | 276421 | 796394 ~ 798832 (-) | True | G174127 |
| TU206147 | lncRNA | upstream | 303666 | 823639 ~ 823896 (-) | True | G174147 |
| TU206150 | lncRNA | upstream | 309963 | 829936 ~ 830269 (-) | True | G174150 |
| TU206157 | lncRNA | upstream | 342958 | 862931 ~ 953387 (-) | True | G174156 |
| XM_026930391.2 | mRNA | downstream | 25840 | 473831 ~ 480942 (-) | True | rerglb |
| XM_034308876.1 | mRNA | downstream | 36599 | 448617 ~ 470183 (-) | True | stk33 |
| XM_026930689.2 | mRNA | downstream | 170974 | 299224 ~ 335808 (-) | True | lmo1 |
| XM_034308875.1 | mRNA | downstream | 234210 | 267730 ~ 272572 (-) | True | ric3a |
| XM_026930344.2 | mRNA | downstream | 410652 | 45726 ~ 96130 (-) | True | pde3b |
| XM_034308477.1 | mRNA | upstream | 72830 | 592803 ~ 602182 (-) | True | tmem9b |
| XM_034308418.1 | mRNA | upstream | 85796 | 605769 ~ 639000 (-) | True | scube2 |
| XM_026930651.2 | mRNA | upstream | 127086 | 647059 ~ 660384 (-) | True | slc7a6 |
| XM_026930298.2 | mRNA | upstream | 145604 | 665577 ~ 678091 (-) | True | si:dkey-181f22.4 |
| XM_034308774.1 | mRNA | upstream | 169195 | 689168 ~ 710231 (-) | True | adgrg1 |
| TU205424 | other | downstream | 472650 | 30281 ~ 34132 (-) | True | calca |
| TU206214 | other | upstream | 441523 | 961496 ~ 963078 (-) | True | G174207 |
| TU206257 | other | upstream | 537683 | 1057656 ~ 1059234 (-) | True | G174247 |
| XR_003403705.1 | other | upstream | 1127356 | 1647329 ~ 1647458 (-) | True | LOC113536795 |
| TU207201 | other | upstream | 2082441 | 2602414 ~ 2603211 (-) | True | G175098 |
| TU207151 | other | upstream | 2234382 | 2754355 ~ 2756525 (-) | True | G175048 |
