Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU206125 |
| length | 425 |
| lncRNA type | inter_gene |
| GC content | 0.59 |
| exon number | 2 |
| gene id | G174127 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 796394 ~ 798832 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU206069 | lncRNA | downstream | 227152 | 568413 ~ 569242 (-) | True | G174074 |
| TU206042 | lncRNA | downstream | 276421 | 506782 ~ 519973 (-) | True | G174054 |
| TU205619 | lncRNA | downstream | 340209 | 455864 ~ 456185 (-) | True | G173685 |
| TU205566 | lncRNA | downstream | 529856 | 263184 ~ 266538 (-) | True | G173639 |
| TU205530 | lncRNA | downstream | 609232 | 185451 ~ 187162 (-) | True | G173603 |
| TU206147 | lncRNA | upstream | 24807 | 823639 ~ 823896 (-) | True | G174147 |
| TU206150 | lncRNA | upstream | 31104 | 829936 ~ 830269 (-) | True | G174150 |
| TU206157 | lncRNA | upstream | 64099 | 862931 ~ 953387 (-) | True | G174156 |
| TU206208 | lncRNA | upstream | 149641 | 948473 ~ 1001717 (-) | True | G174202 |
| TU206217 | lncRNA | upstream | 186759 | 985591 ~ 988469 (-) | True | LOC113536472 |
| XM_034308774.1 | mRNA | downstream | 86163 | 689168 ~ 710231 (-) | True | adgrg1 |
| XM_026930298.2 | mRNA | downstream | 118303 | 665577 ~ 678091 (-) | True | si:dkey-181f22.4 |
| XM_026930651.2 | mRNA | downstream | 136010 | 647059 ~ 660384 (-) | True | slc7a6 |
| XM_034308418.1 | mRNA | downstream | 157394 | 605769 ~ 639000 (-) | True | scube2 |
| XM_034308477.1 | mRNA | downstream | 194212 | 592803 ~ 602182 (-) | True | tmem9b |
| XM_034308880.1 | mRNA | upstream | 109459 | 908291 ~ 913167 (-) | True | nrn1lb |
| XM_026930497.2 | mRNA | upstream | 133399 | 932231 ~ 935096 (-) | True | thap11 |
| XM_034308882.1 | mRNA | upstream | 152553 | 951385 ~ 952329 (-) | True | LOC117598426 |
| XM_026930712.2 | mRNA | upstream | 200227 | 999059 ~ 1002638 (-) | True | fbxl8 |
| XM_026930545.2 | mRNA | upstream | 332199 | 1131031 ~ 1137703 (-) | True | aph1b |
| TU205424 | other | downstream | 762262 | 30281 ~ 34132 (-) | True | calca |
| TU206214 | other | upstream | 162664 | 961496 ~ 963078 (-) | True | G174207 |
| TU206257 | other | upstream | 258824 | 1057656 ~ 1059234 (-) | True | G174247 |
| XR_003403705.1 | other | upstream | 848497 | 1647329 ~ 1647458 (-) | True | LOC113536795 |
| TU207201 | other | upstream | 1803582 | 2602414 ~ 2603211 (-) | True | G175098 |
| TU207151 | other | upstream | 1955523 | 2754355 ~ 2756525 (-) | True | G175048 |
