Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU206255 |
| length | 438 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G174245 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 1056188 ~ 1056625 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU206254 | lncRNA | downstream | 1746 | 1053164 ~ 1054442 (-) | True | G174244 |
| TU206253 | lncRNA | downstream | 6382 | 1049305 ~ 1049806 (-) | True | G174243 |
| TU206186 | lncRNA | downstream | 8465 | 1046060 ~ 1047723 (-) | True | G174183 |
| TU206179 | lncRNA | downstream | 13011 | 1039367 ~ 1043177 (-) | True | G174178 |
| TU206178 | lncRNA | downstream | 17402 | 1034634 ~ 1038786 (-) | True | G174177 |
| TU206256 | lncRNA | upstream | 73 | 1056698 ~ 1056907 (-) | True | G174246 |
| TU206348 | lncRNA | upstream | 278135 | 1334760 ~ 1337021 (-) | True | G174319 |
| TU206351 | lncRNA | upstream | 324692 | 1381317 ~ 1384518 (-) | True | G174322 |
| TU206354 | lncRNA | upstream | 353372 | 1409997 ~ 1414190 (-) | True | G174325 |
| TU206358 | lncRNA | upstream | 362744 | 1419369 ~ 1419745 (-) | True | G174329 |
| XM_026930712.2 | mRNA | downstream | 53550 | 999059 ~ 1002638 (-) | True | fbxl8 |
| XM_034308882.1 | mRNA | downstream | 103859 | 951385 ~ 952329 (-) | True | LOC117598426 |
| XM_026930497.2 | mRNA | downstream | 121092 | 932231 ~ 935096 (-) | True | thap11 |
| XM_034308880.1 | mRNA | downstream | 143021 | 908291 ~ 913167 (-) | True | nrn1lb |
| XM_034308774.1 | mRNA | downstream | 345957 | 689168 ~ 710231 (-) | True | adgrg1 |
| XM_026930545.2 | mRNA | upstream | 74406 | 1131031 ~ 1137703 (-) | True | aph1b |
| XM_026930759.2 | mRNA | upstream | 81896 | 1138521 ~ 1147976 (-) | True | slc38a8b |
| XM_026930733.2 | mRNA | upstream | 91431 | 1148056 ~ 1159962 (-) | False | tmppe |
| XM_034308821.1 | mRNA | upstream | 91444 | 1148069 ~ 1159962 (-) | False | tmppe |
| XM_026930732.2 | mRNA | upstream | 96456 | 1153081 ~ 1159962 (-) | True | tmppe |
| TU206214 | other | downstream | 93110 | 961496 ~ 963078 (-) | True | G174207 |
| TU205424 | other | downstream | 1022056 | 30281 ~ 34132 (-) | True | calca |
| TU206257 | other | upstream | 1031 | 1057656 ~ 1059234 (-) | True | G174247 |
| XR_003403705.1 | other | upstream | 590704 | 1647329 ~ 1647458 (-) | True | LOC113536795 |
| TU207201 | other | upstream | 1545789 | 2602414 ~ 2603211 (-) | True | G175098 |
| TU207151 | other | upstream | 1697730 | 2754355 ~ 2756525 (-) | True | G175048 |
| XR_003403703.1 | other | upstream | 2082202 | 3138827 ~ 3138907 (-) | True | LOC113536793 |
