Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU207031 |
| length | 296 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G174929 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 2411672 ~ 2411967 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU206788 | lncRNA | downstream | 134305 | 2277046 ~ 2277367 (-) | True | G174708 |
| TU206754 | lncRNA | downstream | 145925 | 2222613 ~ 2265747 (-) | True | G174680 |
| TU206745 | lncRNA | downstream | 204367 | 2174167 ~ 2207305 (-) | True | G174674 |
| TU206736 | lncRNA | downstream | 247809 | 2163636 ~ 2163863 (-) | True | G174665 |
| TU206700 | lncRNA | downstream | 337315 | 2074137 ~ 2074357 (-) | True | G174632 |
| TU207052 | lncRNA | upstream | 26648 | 2438615 ~ 2438837 (-) | True | G174949 |
| TU207073 | lncRNA | upstream | 64668 | 2476635 ~ 2476835 (-) | True | G174970 |
| TU207090 | lncRNA | upstream | 78335 | 2490302 ~ 2490506 (-) | True | G174987 |
| TU207133 | lncRNA | upstream | 124663 | 2536630 ~ 2536840 (-) | True | G175030 |
| TU207200 | lncRNA | upstream | 195041 | 2607008 ~ 2607455 (-) | True | G175097 |
| XM_026930846.2 | mRNA | downstream | 95537 | 2301621 ~ 2316135 (-) | True | hnf4b |
| XM_034308536.1 | mRNA | downstream | 229287 | 2178548 ~ 2182385 (-) | True | marveld3 |
| XM_034308537.1 | mRNA | downstream | 229291 | 2178548 ~ 2182381 (-) | False | marveld3 |
| XM_026930791.2 | mRNA | downstream | 339399 | 2054212 ~ 2072273 (-) | False | LOC113536684 |
| XM_026930792.2 | mRNA | downstream | 339399 | 2054212 ~ 2072273 (-) | True | LOC113536684 |
| XM_034308733.1 | mRNA | upstream | 564492 | 2976459 ~ 2997108 (-) | True | dhx38 |
| XM_026930686.2 | mRNA | upstream | 591968 | 3003935 ~ 3008616 (-) | True | LOC113536623 |
| XM_026930760.2 | mRNA | upstream | 608587 | 3020554 ~ 3023480 (-) | True | zgc:162592 |
| XM_026930842.2 | mRNA | upstream | 664011 | 3075978 ~ 3128645 (-) | True | cpne7 |
| XM_026930257.2 | mRNA | upstream | 724469 | 3136436 ~ 3141997 (-) | True | rpl13 |
| XR_003403705.1 | other | downstream | 764214 | 1647329 ~ 1647458 (-) | True | LOC113536795 |
| TU206257 | other | downstream | 1352438 | 1057656 ~ 1059234 (-) | True | G174247 |
| TU206214 | other | downstream | 1448594 | 961496 ~ 963078 (-) | True | G174207 |
| TU205424 | other | downstream | 2377540 | 30281 ~ 34132 (-) | True | calca |
| TU207201 | other | upstream | 190447 | 2602414 ~ 2603211 (-) | True | G175098 |
| TU207151 | other | upstream | 342388 | 2754355 ~ 2756525 (-) | True | G175048 |
| XR_003403703.1 | other | upstream | 726860 | 3138827 ~ 3138907 (-) | True | LOC113536793 |
| XR_003403704.2 | other | upstream | 728103 | 3140070 ~ 3140161 (-) | True | LOC113536794 |
| XR_003403706.2 | other | upstream | 889172 | 3301139 ~ 3301270 (-) | True | LOC113536796 |
