Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU207052 |
| length | 223 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G174949 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 2438615 ~ 2438837 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU207031 | lncRNA | downstream | 26648 | 2411672 ~ 2411967 (-) | True | G174929 |
| TU206788 | lncRNA | downstream | 161248 | 2277046 ~ 2277367 (-) | True | G174708 |
| TU206754 | lncRNA | downstream | 172868 | 2222613 ~ 2265747 (-) | True | G174680 |
| TU206745 | lncRNA | downstream | 231310 | 2174167 ~ 2207305 (-) | True | G174674 |
| TU206736 | lncRNA | downstream | 274752 | 2163636 ~ 2163863 (-) | True | G174665 |
| TU207073 | lncRNA | upstream | 37798 | 2476635 ~ 2476835 (-) | True | G174970 |
| TU207090 | lncRNA | upstream | 51465 | 2490302 ~ 2490506 (-) | True | G174987 |
| TU207133 | lncRNA | upstream | 97793 | 2536630 ~ 2536840 (-) | True | G175030 |
| TU207200 | lncRNA | upstream | 168171 | 2607008 ~ 2607455 (-) | True | G175097 |
| TU207202 | lncRNA | upstream | 170092 | 2608929 ~ 2609186 (-) | True | G175099 |
| XM_026930846.2 | mRNA | downstream | 122480 | 2301621 ~ 2316135 (-) | True | hnf4b |
| XM_034308536.1 | mRNA | downstream | 256230 | 2178548 ~ 2182385 (-) | True | marveld3 |
| XM_034308537.1 | mRNA | downstream | 256234 | 2178548 ~ 2182381 (-) | False | marveld3 |
| XM_026930791.2 | mRNA | downstream | 366342 | 2054212 ~ 2072273 (-) | False | LOC113536684 |
| XM_034308733.1 | mRNA | upstream | 537622 | 2976459 ~ 2997108 (-) | True | dhx38 |
| XM_026930686.2 | mRNA | upstream | 565098 | 3003935 ~ 3008616 (-) | True | LOC113536623 |
| XM_026930760.2 | mRNA | upstream | 581717 | 3020554 ~ 3023480 (-) | True | zgc:162592 |
| XM_026930842.2 | mRNA | upstream | 637141 | 3075978 ~ 3128645 (-) | True | cpne7 |
| XM_026930257.2 | mRNA | upstream | 697599 | 3136436 ~ 3141997 (-) | True | rpl13 |
| XR_003403705.1 | other | downstream | 791157 | 1647329 ~ 1647458 (-) | True | LOC113536795 |
| TU206257 | other | downstream | 1379381 | 1057656 ~ 1059234 (-) | True | G174247 |
| TU206214 | other | downstream | 1475537 | 961496 ~ 963078 (-) | True | G174207 |
| TU205424 | other | downstream | 2404483 | 30281 ~ 34132 (-) | True | calca |
| TU207201 | other | upstream | 163577 | 2602414 ~ 2603211 (-) | True | G175098 |
| TU207151 | other | upstream | 315518 | 2754355 ~ 2756525 (-) | True | G175048 |
| XR_003403703.1 | other | upstream | 699990 | 3138827 ~ 3138907 (-) | True | LOC113536793 |
| XR_003403704.2 | other | upstream | 701233 | 3140070 ~ 3140161 (-) | True | LOC113536794 |
| XR_003403706.2 | other | upstream | 862302 | 3301139 ~ 3301270 (-) | True | LOC113536796 |
