Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU207133 |
| length | 211 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G175030 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 2536630 ~ 2536840 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU207090 | lncRNA | downstream | 46124 | 2490302 ~ 2490506 (-) | True | G174987 |
| TU207073 | lncRNA | downstream | 59795 | 2476635 ~ 2476835 (-) | True | G174970 |
| TU207052 | lncRNA | downstream | 97793 | 2438615 ~ 2438837 (-) | True | G174949 |
| TU207031 | lncRNA | downstream | 124663 | 2411672 ~ 2411967 (-) | True | G174929 |
| TU206788 | lncRNA | downstream | 259263 | 2277046 ~ 2277367 (-) | True | G174708 |
| TU207200 | lncRNA | upstream | 70168 | 2607008 ~ 2607455 (-) | True | G175097 |
| TU207202 | lncRNA | upstream | 72089 | 2608929 ~ 2609186 (-) | True | G175099 |
| TU207203 | lncRNA | upstream | 73234 | 2610074 ~ 2611557 (-) | True | G175100 |
| TU207204 | lncRNA | upstream | 75608 | 2612448 ~ 2612915 (-) | True | G175101 |
| TU207205 | lncRNA | upstream | 76103 | 2612943 ~ 2613769 (-) | True | G175102 |
| XM_026930846.2 | mRNA | downstream | 220495 | 2301621 ~ 2316135 (-) | True | hnf4b |
| XM_034308536.1 | mRNA | downstream | 354245 | 2178548 ~ 2182385 (-) | True | marveld3 |
| XM_034308537.1 | mRNA | downstream | 354249 | 2178548 ~ 2182381 (-) | False | marveld3 |
| XM_026930791.2 | mRNA | downstream | 464357 | 2054212 ~ 2072273 (-) | False | LOC113536684 |
| XM_034308733.1 | mRNA | upstream | 439619 | 2976459 ~ 2997108 (-) | True | dhx38 |
| XM_026930686.2 | mRNA | upstream | 467095 | 3003935 ~ 3008616 (-) | True | LOC113536623 |
| XM_026930760.2 | mRNA | upstream | 483714 | 3020554 ~ 3023480 (-) | True | zgc:162592 |
| XM_026930842.2 | mRNA | upstream | 539138 | 3075978 ~ 3128645 (-) | True | cpne7 |
| XM_026930257.2 | mRNA | upstream | 599596 | 3136436 ~ 3141997 (-) | True | rpl13 |
| XR_003403705.1 | other | downstream | 889172 | 1647329 ~ 1647458 (-) | True | LOC113536795 |
| TU206257 | other | downstream | 1477396 | 1057656 ~ 1059234 (-) | True | G174247 |
| TU206214 | other | downstream | 1573552 | 961496 ~ 963078 (-) | True | G174207 |
| TU205424 | other | downstream | 2502498 | 30281 ~ 34132 (-) | True | calca |
| TU207201 | other | upstream | 65574 | 2602414 ~ 2603211 (-) | True | G175098 |
| TU207151 | other | upstream | 217515 | 2754355 ~ 2756525 (-) | True | G175048 |
| XR_003403703.1 | other | upstream | 601987 | 3138827 ~ 3138907 (-) | True | LOC113536793 |
| XR_003403704.2 | other | upstream | 603230 | 3140070 ~ 3140161 (-) | True | LOC113536794 |
| XR_003403706.2 | other | upstream | 764299 | 3301139 ~ 3301270 (-) | True | LOC113536796 |
