Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU207460 |
| length | 221 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G175330 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 3206751 ~ 3206971 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU207459 | lncRNA | downstream | 1285 | 3205257 ~ 3205466 (-) | True | G175329 |
| TU207332 | lncRNA | downstream | 199089 | 3007004 ~ 3007662 (-) | True | G175213 |
| TU207149 | lncRNA | downstream | 440146 | 2760210 ~ 2766605 (-) | True | G175046 |
| TU207148 | lncRNA | downstream | 446925 | 2756832 ~ 2759826 (-) | True | G175045 |
| TU207219 | lncRNA | downstream | 475878 | 2729695 ~ 2730873 (-) | True | G175110 |
| TU207463 | lncRNA | upstream | 3176 | 3210147 ~ 3210404 (-) | True | G175333 |
| TU207646 | lncRNA | upstream | 305020 | 3511991 ~ 3512232 (-) | True | G175483 |
| TU207665 | lncRNA | upstream | 342894 | 3549865 ~ 3581971 (-) | True | serf2 |
| XR_003403695.2 | lncRNA | upstream | 365687 | 3572658 ~ 3577973 (-) | True | LOC113536694 |
| TU207812 | lncRNA | upstream | 585566 | 3792537 ~ 3819530 (-) | True | G175610 |
| XM_034308870.1 | mRNA | downstream | 17456 | 3169323 ~ 3189295 (-) | False | nfat5b |
| XM_026930808.2 | mRNA | downstream | 17500 | 3169323 ~ 3189251 (-) | False | nfat5b |
| XM_026930807.2 | mRNA | downstream | 18587 | 3169323 ~ 3188164 (-) | True | nfat5b |
| XM_026930654.2 | mRNA | downstream | 39472 | 3155959 ~ 3167279 (-) | False | kars1 |
| XM_034308872.1 | mRNA | downstream | 39492 | 3155959 ~ 3167259 (-) | False | kars1 |
| XM_034308885.1 | mRNA | upstream | 27099 | 3234070 ~ 3252896 (-) | True | pkd1l2b |
| XM_026930925.1 | mRNA | upstream | 61473 | 3268444 ~ 3269415 (-) | True | LOC113536785 |
| XM_026930924.2 | mRNA | upstream | 69892 | 3276863 ~ 3277834 (-) | True | LOC113536784 |
| XM_026930672.2 | mRNA | upstream | 180193 | 3387164 ~ 3469814 (-) | False | gli2b |
| XM_026930671.2 | mRNA | upstream | 180193 | 3387164 ~ 3469814 (-) | True | gli2b |
| XR_003403704.2 | other | downstream | 66590 | 3140070 ~ 3140161 (-) | True | LOC113536794 |
| XR_003403703.1 | other | downstream | 67844 | 3138827 ~ 3138907 (-) | True | LOC113536793 |
| TU207151 | other | downstream | 450226 | 2754355 ~ 2756525 (-) | True | G175048 |
| TU207201 | other | downstream | 603540 | 2602414 ~ 2603211 (-) | True | G175098 |
| XR_003403705.1 | other | downstream | 1559293 | 1647329 ~ 1647458 (-) | True | LOC113536795 |
| XR_003403706.2 | other | upstream | 94168 | 3301139 ~ 3301270 (-) | True | LOC113536796 |
| TU207666 | other | upstream | 362370 | 3569341 ~ 3572262 (-) | True | G175497 |
| XR_003403696.2 | other | upstream | 648220 | 3855191 ~ 3909891 (-) | False | mical2a |
| XR_004579078.1 | other | upstream | 648220 | 3855191 ~ 3909889 (-) | False | mical2a |
| TU207939 | other | upstream | 785755 | 3992726 ~ 3996433 (-) | True | bola3 |
