Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU207812 |
| length | 795 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G175610 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 3792537 ~ 3819530 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU207665 | lncRNA | downstream | 210566 | 3549865 ~ 3581971 (-) | True | serf2 |
| XR_003403695.2 | lncRNA | downstream | 214564 | 3572658 ~ 3577973 (-) | True | LOC113536694 |
| TU207646 | lncRNA | downstream | 280305 | 3511991 ~ 3512232 (-) | True | G175483 |
| TU207463 | lncRNA | downstream | 582133 | 3210147 ~ 3210404 (-) | True | G175333 |
| TU207460 | lncRNA | downstream | 585566 | 3206751 ~ 3206971 (-) | True | G175330 |
| TU207893 | lncRNA | upstream | 102783 | 3922313 ~ 3922941 (-) | True | G175676 |
| TU208008 | lncRNA | upstream | 256614 | 4076144 ~ 4137879 (-) | True | G175767 |
| TU208017 | lncRNA | upstream | 264442 | 4083972 ~ 4086193 (-) | True | G175775 |
| TU208115 | lncRNA | upstream | 479447 | 4298977 ~ 4299868 (-) | True | G175854 |
| TU208186 | lncRNA | upstream | 679948 | 4499478 ~ 4504321 (-) | False | lto1 |
| XM_026930382.2 | mRNA | downstream | 54983 | 3735746 ~ 3737554 (-) | True | rassf10b |
| XM_026930850.2 | mRNA | downstream | 113280 | 3659384 ~ 3679257 (-) | False | arntl1b |
| XM_026930848.2 | mRNA | downstream | 113280 | 3659384 ~ 3679257 (-) | True | arntl1b |
| XM_034308989.1 | mRNA | downstream | 114036 | 3660325 ~ 3678501 (-) | False | arntl1b |
| XM_034308797.1 | mRNA | downstream | 151577 | 3625423 ~ 3640960 (-) | False | znf710b |
| XM_026930511.2 | mRNA | upstream | 1706 | 3821236 ~ 3839338 (-) | True | parvab |
| XM_034308622.1 | mRNA | upstream | 32317 | 3851847 ~ 3909893 (-) | False | mical2a |
| XM_026930830.2 | mRNA | upstream | 32317 | 3851847 ~ 3909893 (-) | True | mical2a |
| XM_026930831.2 | mRNA | upstream | 32317 | 3851847 ~ 3909892 (-) | False | mical2a |
| XM_034308621.1 | mRNA | upstream | 32317 | 3851847 ~ 3909891 (-) | False | mical2a |
| TU207666 | other | downstream | 220275 | 3569341 ~ 3572262 (-) | True | G175497 |
| XR_003403706.2 | other | downstream | 491267 | 3301139 ~ 3301270 (-) | True | LOC113536796 |
| XR_003403704.2 | other | downstream | 652376 | 3140070 ~ 3140161 (-) | True | LOC113536794 |
| XR_003403703.1 | other | downstream | 653630 | 3138827 ~ 3138907 (-) | True | LOC113536793 |
| TU207151 | other | downstream | 1036012 | 2754355 ~ 2756525 (-) | True | G175048 |
| XR_003403696.2 | other | upstream | 35661 | 3855191 ~ 3909891 (-) | False | mical2a |
| XR_004579078.1 | other | upstream | 35661 | 3855191 ~ 3909889 (-) | False | mical2a |
| TU207939 | other | upstream | 173196 | 3992726 ~ 3996433 (-) | True | bola3 |
| XR_003403702.2 | other | upstream | 229335 | 4048865 ~ 4049043 (-) | True | LOC113536792 |
| XR_003403701.2 | other | upstream | 233059 | 4052589 ~ 4052767 (-) | True | LOC113536791 |
