Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU208689 |
| length | 792 |
| RNA type | TUCP |
| GC content | 0.54 |
| exon number | 6 |
| gene id | trip4 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 5139610 ~ 5196818 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU208726 | lncRNA | downstream | 26342 | 5110114 ~ 5113268 (-) | True | G176336 |
| TU208332 | lncRNA | downstream | 292469 | 4840748 ~ 4847141 (-) | True | G176029 |
| TU208331 | lncRNA | downstream | 298917 | 4839988 ~ 4840693 (-) | True | G176028 |
| TU208311 | lncRNA | downstream | 403194 | 4732382 ~ 4736416 (-) | True | G176015 |
| TU208248 | lncRNA | downstream | 506825 | 4630348 ~ 4632785 (-) | True | G175967 |
| TU208744 | lncRNA | upstream | 114092 | 5304614 ~ 5407099 (-) | True | G176354 |
| TU208989 | lncRNA | upstream | 441304 | 5631826 ~ 5715020 (-) | True | G176556 |
| TU209305 | lncRNA | upstream | 892306 | 6082828 ~ 6167802 (-) | True | G176817 |
| TU209304 | lncRNA | upstream | 981676 | 6172198 ~ 6176354 (-) | True | G176816 |
| TU209329 | lncRNA | upstream | 993813 | 6184335 ~ 6188288 (-) | True | G176832 |
| XM_026930779.2 | mRNA | downstream | 6060 | 5081652 ~ 5133550 (-) | True | znf609b |
| XM_026930658.2 | mRNA | downstream | 65308 | 5047351 ~ 5074302 (-) | True | gramd2aa |
| XM_034308867.1 | mRNA | downstream | 72119 | 5050059 ~ 5067491 (-) | False | gramd2aa |
| XM_026930656.2 | mRNA | downstream | 72124 | 5047351 ~ 5067486 (-) | False | gramd2aa |
| XM_026930655.2 | mRNA | downstream | 72126 | 5047351 ~ 5067484 (-) | False | gramd2aa |
| XM_026930897.2 | mRNA | upstream | 8621 | 5199143 ~ 5220239 (-) | True | chrna7a |
| XM_026930601.2 | mRNA | upstream | 38804 | 5229326 ~ 5302351 (-) | True | LOC113536575 |
| XM_026930602.2 | mRNA | upstream | 38804 | 5229326 ~ 5302350 (-) | False | LOC113536575 |
| XM_026930390.2 | mRNA | upstream | 127830 | 5318352 ~ 5325458 (-) | False | cdhr5a |
| XM_026930389.2 | mRNA | upstream | 127830 | 5318352 ~ 5325458 (-) | True | cdhr5a |
| TU208693 | other | downstream | 58715 | 5079817 ~ 5080895 (-) | True | G176307 |
| XR_003403708.1 | other | downstream | 1039184 | 4100371 ~ 4100426 (-) | True | LOC113536798 |
| XR_003403707.1 | other | downstream | 1039759 | 4099795 ~ 4099851 (-) | True | LOC113536797 |
| XR_003403699.1 | other | downstream | 1042840 | 4096714 ~ 4096770 (-) | True | LOC113536789 |
| XR_003403709.1 | other | downstream | 1044348 | 4095207 ~ 4095262 (-) | True | LOC113536799 |
| TU208736 | other | upstream | 1442 | 5191964 ~ 5196818 (-) | False | trip4 |
| trnai-uau_1 | other | upstream | 99980 | 5290502 ~ 5290594 (-) | True | trnai-uau_1 |
| trnai-uau_2 | other | upstream | 123640 | 5314162 ~ 5314254 (-) | True | trnai-uau_2 |
| TU209010 | other | upstream | 505936 | 5696458 ~ 5708265 (-) | True | LOC113536561 |
| TU209012 | other | upstream | 505936 | 5696458 ~ 5708265 (-) | False | LOC113536561 |
