Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU213439 |
| length | 414 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 3 |
| gene id | G180361 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 12364099 ~ 12366101 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU213324 | lncRNA | downstream | 63234 | 12174862 ~ 12300865 (-) | False | G180273 |
| XR_004579081.1 | lncRNA | downstream | 114986 | 12239119 ~ 12249113 (-) | True | LOC117598410 |
| TU213325 | lncRNA | downstream | 130285 | 12189228 ~ 12233814 (-) | True | G180273 |
| TU213322 | lncRNA | downstream | 130285 | 12206459 ~ 12233814 (-) | False | G180273 |
| TU213329 | lncRNA | downstream | 279782 | 12075238 ~ 12084317 (-) | True | G180277 |
| TU213487 | lncRNA | upstream | 120574 | 12486675 ~ 12487417 (-) | True | G180387 |
| TU213492 | lncRNA | upstream | 141840 | 12507941 ~ 12508232 (-) | True | G180392 |
| TU213546 | lncRNA | upstream | 209860 | 12575961 ~ 12619651 (-) | False | G180429 |
| TU213549 | lncRNA | upstream | 212617 | 12578718 ~ 12619651 (-) | True | G180429 |
| TU213550 | lncRNA | upstream | 213400 | 12579501 ~ 12584770 (-) | True | G180430 |
| XM_026930477.2 | mRNA | downstream | 8175 | 12353145 ~ 12355924 (-) | True | lsm7 |
| XM_034308688.1 | mRNA | downstream | 11090 | 12334202 ~ 12353009 (-) | False | tmprss9 |
| XM_026930460.2 | mRNA | downstream | 11090 | 12334202 ~ 12353009 (-) | False | tmprss9 |
| XM_034308687.1 | mRNA | downstream | 11090 | 12334202 ~ 12353009 (-) | True | tmprss9 |
| XM_034308689.1 | mRNA | downstream | 11090 | 12335025 ~ 12353009 (-) | False | tmprss9 |
| XM_034308852.1 | mRNA | upstream | 7134 | 12373235 ~ 12387875 (-) | True | mfsd14a1 |
| XM_026930471.2 | mRNA | upstream | 22355 | 12388456 ~ 12395897 (-) | False | ifi44g |
| XM_026930470.2 | mRNA | upstream | 22355 | 12388456 ~ 12395897 (-) | True | ifi44g |
| XM_026930453.2 | mRNA | upstream | 32845 | 12398946 ~ 12427447 (-) | True | map1sa |
| XM_026930796.2 | mRNA | upstream | 65758 | 12431859 ~ 12434169 (-) | True | cart1 |
| TU212758 | other | downstream | 860137 | 11496074 ~ 11503962 (-) | False | LOC117598430 |
| TU212749 | other | downstream | 948659 | 11409092 ~ 11415440 (-) | False | G179803 |
| TU212647 | other | downstream | 1117794 | 11243975 ~ 11246305 (-) | False | nppc |
| TU211855 | other | downstream | 2548874 | 9813892 ~ 9815225 (-) | True | G179035 |
| TU211757 | other | downstream | 2840769 | 9522416 ~ 9523330 (-) | True | G178942 |
| TU213621 | other | upstream | 351260 | 12717361 ~ 12720476 (-) | True | G180485 |
| trnam-cau_27 | other | upstream | 870302 | 13236403 ~ 13236475 (-) | True | trnam-cau_27 |
| TU214009 | other | upstream | 873648 | 13239749 ~ 13243162 (-) | False | rpp21 |
| TU214564 | other | upstream | 1994835 | 14360936 ~ 14361647 (-) | False | LOC113527598 |
| XR_004579086.1 | other | upstream | 2042625 | 14408726 ~ 14415069 (-) | False | rx1 |
