Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU213487 |
| length | 743 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G180387 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 12486675 ~ 12487417 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU213439 | lncRNA | downstream | 120574 | 12364099 ~ 12366101 (-) | True | G180361 |
| TU213324 | lncRNA | downstream | 185810 | 12174862 ~ 12300865 (-) | False | G180273 |
| XR_004579081.1 | lncRNA | downstream | 237562 | 12239119 ~ 12249113 (-) | True | LOC117598410 |
| TU213325 | lncRNA | downstream | 252861 | 12189228 ~ 12233814 (-) | True | G180273 |
| TU213322 | lncRNA | downstream | 252861 | 12206459 ~ 12233814 (-) | False | G180273 |
| TU213492 | lncRNA | upstream | 20524 | 12507941 ~ 12508232 (-) | True | G180392 |
| TU213546 | lncRNA | upstream | 88544 | 12575961 ~ 12619651 (-) | False | G180429 |
| TU213549 | lncRNA | upstream | 91301 | 12578718 ~ 12619651 (-) | True | G180429 |
| TU213550 | lncRNA | upstream | 92084 | 12579501 ~ 12584770 (-) | True | G180430 |
| TU213539 | lncRNA | upstream | 114759 | 12602176 ~ 12603567 (-) | False | G180428 |
| XM_026930505.2 | mRNA | downstream | 2624 | 12479396 ~ 12484051 (-) | False | lrrc39 |
| XM_026930504.2 | mRNA | downstream | 2625 | 12479396 ~ 12484050 (-) | True | lrrc39 |
| XM_034308404.1 | mRNA | downstream | 13227 | 12436097 ~ 12473448 (-) | True | osbpl1a |
| XM_026930796.2 | mRNA | downstream | 52506 | 12431859 ~ 12434169 (-) | True | cart1 |
| XM_026930453.2 | mRNA | downstream | 59228 | 12398946 ~ 12427447 (-) | True | map1sa |
| XM_026930292.2 | mRNA | upstream | 791 | 12488208 ~ 12495668 (-) | True | dbt |
| XM_026930485.2 | mRNA | upstream | 179306 | 12666723 ~ 12676899 (-) | True | dph5 |
| XM_026930383.2 | mRNA | upstream | 248648 | 12736065 ~ 12744758 (-) | True | serpinc1 |
| XM_026930262.2 | mRNA | upstream | 264661 | 12752078 ~ 12782535 (-) | True | rc3h1a |
| XM_034308777.1 | mRNA | upstream | 264661 | 12752078 ~ 12776243 (-) | False | rc3h1a |
| TU212758 | other | downstream | 982713 | 11496074 ~ 11503962 (-) | False | LOC117598430 |
| TU212749 | other | downstream | 1071235 | 11409092 ~ 11415440 (-) | False | G179803 |
| TU212647 | other | downstream | 1240370 | 11243975 ~ 11246305 (-) | False | nppc |
| TU211855 | other | downstream | 2671450 | 9813892 ~ 9815225 (-) | True | G179035 |
| TU211757 | other | downstream | 2963345 | 9522416 ~ 9523330 (-) | True | G178942 |
| TU213621 | other | upstream | 229944 | 12717361 ~ 12720476 (-) | True | G180485 |
| trnam-cau_27 | other | upstream | 748986 | 13236403 ~ 13236475 (-) | True | trnam-cau_27 |
| TU214009 | other | upstream | 752332 | 13239749 ~ 13243162 (-) | False | rpp21 |
| TU214564 | other | upstream | 1873519 | 14360936 ~ 14361647 (-) | False | LOC113527598 |
| XR_004579086.1 | other | upstream | 1921309 | 14408726 ~ 14415069 (-) | False | rx1 |
