Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026930686.2 |
| length | 939 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 5 |
| gene id | LOC113536623 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 3003935 ~ 3008616 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| id | description |
|---|---|
| K23490 | CYB5; cytochrome b5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU207149 | lncRNA | downstream | 237330 | 2760210 ~ 2766605 (-) | True | G175046 |
| TU207148 | lncRNA | downstream | 244109 | 2756832 ~ 2759826 (-) | True | G175045 |
| TU207219 | lncRNA | downstream | 273062 | 2729695 ~ 2730873 (-) | True | G175110 |
| TU207218 | lncRNA | downstream | 278182 | 2725094 ~ 2725753 (-) | True | G175109 |
| TU207153 | lncRNA | downstream | 296052 | 2613845 ~ 2707883 (-) | True | G175050 |
| TU207459 | lncRNA | upstream | 196641 | 3205257 ~ 3205466 (-) | True | G175329 |
| TU207460 | lncRNA | upstream | 198135 | 3206751 ~ 3206971 (-) | True | G175330 |
| TU207463 | lncRNA | upstream | 201531 | 3210147 ~ 3210404 (-) | True | G175333 |
| TU207646 | lncRNA | upstream | 503375 | 3511991 ~ 3512232 (-) | True | G175483 |
| TU207665 | lncRNA | upstream | 541249 | 3549865 ~ 3581971 (-) | True | serf2 |
| XM_034308733.1 | mRNA | downstream | 6827 | 2976459 ~ 2997108 (-) | True | dhx38 |
| XM_026930846.2 | mRNA | downstream | 687800 | 2301621 ~ 2316135 (-) | True | hnf4b |
| XM_034308536.1 | mRNA | downstream | 821550 | 2178548 ~ 2182385 (-) | True | marveld3 |
| XM_034308537.1 | mRNA | downstream | 821554 | 2178548 ~ 2182381 (-) | False | marveld3 |
| XM_026930791.2 | mRNA | downstream | 931662 | 2054212 ~ 2072273 (-) | False | LOC113536684 |
| XM_026930760.2 | mRNA | upstream | 11938 | 3020554 ~ 3023480 (-) | True | zgc:162592 |
| XM_026930842.2 | mRNA | upstream | 67362 | 3075978 ~ 3128645 (-) | True | cpne7 |
| XM_026930257.2 | mRNA | upstream | 127820 | 3136436 ~ 3141997 (-) | True | rpl13 |
| XM_026930313.2 | mRNA | upstream | 136166 | 3144782 ~ 3152111 (-) | True | gcshb |
| XM_034308871.1 | mRNA | upstream | 146925 | 3155541 ~ 3164360 (-) | True | kars1 |
| TU207151 | other | downstream | 247410 | 2754355 ~ 2756525 (-) | True | G175048 |
| TU207201 | other | downstream | 400724 | 2602414 ~ 2603211 (-) | True | G175098 |
| XR_003403705.1 | other | downstream | 1356477 | 1647329 ~ 1647458 (-) | True | LOC113536795 |
| TU206257 | other | downstream | 1944701 | 1057656 ~ 1059234 (-) | True | G174247 |
| TU206214 | other | downstream | 2040857 | 961496 ~ 963078 (-) | True | G174207 |
| XR_003403703.1 | other | upstream | 130211 | 3138827 ~ 3138907 (-) | True | LOC113536793 |
| XR_003403704.2 | other | upstream | 131454 | 3140070 ~ 3140161 (-) | True | LOC113536794 |
| XR_003403706.2 | other | upstream | 292523 | 3301139 ~ 3301270 (-) | True | LOC113536796 |
| TU207666 | other | upstream | 560725 | 3569341 ~ 3572262 (-) | True | G175497 |
| XR_003403696.2 | other | upstream | 846575 | 3855191 ~ 3909891 (-) | False | mical2a |
