Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034308882.1 |
| length | 561 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 2 |
| gene id | LOC117598426 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 951385 ~ 952329 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU206150 | lncRNA | downstream | 121116 | 829936 ~ 830269 (-) | True | G174150 |
| TU206147 | lncRNA | downstream | 127489 | 823639 ~ 823896 (-) | True | G174147 |
| TU206125 | lncRNA | downstream | 152553 | 796394 ~ 798832 (-) | True | G174127 |
| TU206069 | lncRNA | downstream | 382143 | 568413 ~ 569242 (-) | True | G174074 |
| TU206042 | lncRNA | downstream | 431412 | 506782 ~ 519973 (-) | True | G174054 |
| TU206217 | lncRNA | upstream | 33262 | 985591 ~ 988469 (-) | True | LOC113536472 |
| XR_003403682.2 | lncRNA | upstream | 34187 | 986516 ~ 988207 (-) | False | LOC113536472 |
| XR_003403683.2 | lncRNA | upstream | 34187 | 986516 ~ 988207 (-) | False | LOC113536472 |
| TU206242 | lncRNA | upstream | 48831 | 1001160 ~ 1001423 (-) | False | fbxl8 |
| TU206241 | lncRNA | upstream | 49814 | 1002143 ~ 1003032 (-) | False | fbxl8 |
| XM_026930497.2 | mRNA | downstream | 16289 | 932231 ~ 935096 (-) | True | thap11 |
| XM_034308880.1 | mRNA | downstream | 38218 | 908291 ~ 913167 (-) | True | nrn1lb |
| XM_034308774.1 | mRNA | downstream | 241154 | 689168 ~ 710231 (-) | True | adgrg1 |
| XM_026930298.2 | mRNA | downstream | 273294 | 665577 ~ 678091 (-) | True | si:dkey-181f22.4 |
| XM_026930651.2 | mRNA | downstream | 291001 | 647059 ~ 660384 (-) | True | slc7a6 |
| XM_026930712.2 | mRNA | upstream | 46730 | 999059 ~ 1002638 (-) | True | fbxl8 |
| XM_026930545.2 | mRNA | upstream | 178702 | 1131031 ~ 1137703 (-) | True | aph1b |
| XM_026930759.2 | mRNA | upstream | 186192 | 1138521 ~ 1147976 (-) | True | slc38a8b |
| XM_026930733.2 | mRNA | upstream | 195727 | 1148056 ~ 1159962 (-) | False | tmppe |
| XM_034308821.1 | mRNA | upstream | 195740 | 1148069 ~ 1159962 (-) | False | tmppe |
| TU205424 | other | downstream | 917253 | 30281 ~ 34132 (-) | True | calca |
| TU206214 | other | upstream | 9167 | 961496 ~ 963078 (-) | True | G174207 |
| TU206257 | other | upstream | 105327 | 1057656 ~ 1059234 (-) | True | G174247 |
| XR_003403705.1 | other | upstream | 695000 | 1647329 ~ 1647458 (-) | True | LOC113536795 |
| TU207201 | other | upstream | 1650085 | 2602414 ~ 2603211 (-) | True | G175098 |
| TU207151 | other | upstream | 1802026 | 2754355 ~ 2756525 (-) | True | G175048 |
