Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403708.1 |
| length | 56 |
| RNA type | ncRNA |
| GC content | 0.34 |
| exon number | 1 |
| gene id | LOC113536798 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 4100371 ~ 4100426 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU208017 | lncRNA | downstream | 14178 | 4083972 ~ 4086193 (-) | True | G175775 |
| TU207893 | lncRNA | downstream | 177430 | 3922313 ~ 3922941 (-) | True | G175676 |
| TU207812 | lncRNA | downstream | 280841 | 3792537 ~ 3819530 (-) | True | G175610 |
| TU207813 | lncRNA | downstream | 304446 | 3795679 ~ 3795925 (-) | True | G175611 |
| XR_003403695.2 | lncRNA | downstream | 522398 | 3572658 ~ 3577973 (-) | True | LOC113536694 |
| TU208115 | lncRNA | upstream | 198551 | 4298977 ~ 4299868 (-) | True | G175854 |
| TU208186 | lncRNA | upstream | 399052 | 4499478 ~ 4504321 (-) | False | lto1 |
| TU208239 | lncRNA | upstream | 521702 | 4622128 ~ 4622987 (-) | True | G175963 |
| TU208248 | lncRNA | upstream | 529922 | 4630348 ~ 4632785 (-) | True | G175967 |
| TU208311 | lncRNA | upstream | 631956 | 4732382 ~ 4736416 (-) | True | G176015 |
| XM_026930512.2 | mRNA | downstream | 39528 | 4040364 ~ 4060843 (-) | True | ipo7 |
| XM_026930867.2 | mRNA | downstream | 82577 | 4007408 ~ 4017794 (-) | False | bco1l |
| XM_026930855.2 | mRNA | upstream | 45426 | 4145852 ~ 4159196 (-) | True | adgrg3 |
| XM_026930740.2 | mRNA | upstream | 72345 | 4172771 ~ 4181748 (-) | True | LOC113536655 |
| XM_026930923.2 | mRNA | upstream | 91702 | 4192128 ~ 4201910 (-) | True | LOC113536783 |
| XM_026930361.2 | mRNA | upstream | 168748 | 4269174 ~ 4279585 (-) | True | dhcr7 |
| XM_026930851.2 | mRNA | upstream | 398520 | 4498946 ~ 4504329 (-) | True | lto1 |
| XR_003403707.1 | other | downstream | 520 | 4099795 ~ 4099851 (-) | True | LOC113536797 |
| XR_003403699.1 | other | downstream | 3601 | 4096714 ~ 4096770 (-) | True | LOC113536789 |
| XR_003403709.1 | other | downstream | 5109 | 4095207 ~ 4095262 (-) | True | LOC113536799 |
| XR_003403701.2 | other | downstream | 47604 | 4052589 ~ 4052767 (-) | True | LOC113536791 |
| XR_003403702.2 | other | downstream | 51328 | 4048865 ~ 4049043 (-) | True | LOC113536792 |
| TU208693 | other | upstream | 979391 | 5079817 ~ 5080895 (-) | True | G176307 |
| TU208689 | other | upstream | 1039184 | 5139610 ~ 5190522 (-) | False | trip4 |
| TU208736 | other | upstream | 1091538 | 5191964 ~ 5196818 (-) | False | trip4 |
| trnai-uau_1 | other | upstream | 1190076 | 5290502 ~ 5290594 (-) | True | trnai-uau_1 |
| trnai-uau_2 | other | upstream | 1213736 | 5314162 ~ 5314254 (-) | True | trnai-uau_2 |
