Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034311714.1 |
| length | 726 |
| RNA type | mRNA |
| GC content | 0.37 |
| exon number | 3 |
| gene id | LOC117599234 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 9768247 ~ 9771563 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579742.1 | lncRNA | downstream | 60250 | 9704915 ~ 9708803 (-) | True | LOC117599281 |
| TU298233 | lncRNA | downstream | 270752 | 9498090 ~ 9498301 (-) | True | G251963 |
| TU298225 | lncRNA | downstream | 279190 | 9488270 ~ 9489863 (-) | True | G251955 |
| XR_004579745.1 | lncRNA | downstream | 316885 | 9449297 ~ 9452168 (-) | True | LOC117599283 |
| TU298192 | lncRNA | downstream | 329417 | 9439347 ~ 9439636 (-) | True | G251924 |
| TU298584 | lncRNA | upstream | 75599 | 9847116 ~ 9849696 (-) | True | G252265 |
| TU298642 | lncRNA | upstream | 123767 | 9895284 ~ 9895525 (-) | True | G252311 |
| TU298662 | lncRNA | upstream | 145912 | 9917429 ~ 9920148 (-) | True | G252331 |
| TU298869 | lncRNA | upstream | 283360 | 10054877 ~ 10056083 (-) | True | G252479 |
| XR_004579652.1 | lncRNA | upstream | 408271 | 10179788 ~ 10181888 (-) | True | LOC117599207 |
| XM_034312058.1 | mRNA | downstream | 3199 | 9729374 ~ 9765854 (-) | False | eif4g3b |
| XM_026921020.2 | mRNA | downstream | 3199 | 9729374 ~ 9765854 (-) | False | eif4g3b |
| XM_026921019.2 | mRNA | downstream | 3199 | 9729374 ~ 9765854 (-) | False | eif4g3b |
| XM_026921018.2 | mRNA | downstream | 3199 | 9729374 ~ 9765854 (-) | False | eif4g3b |
| XM_026921017.2 | mRNA | downstream | 3199 | 9729374 ~ 9765854 (-) | True | eif4g3b |
| XM_026921235.2 | mRNA | upstream | 2966 | 9774483 ~ 9780995 (-) | True | lactbl1a |
| XM_026920318.2 | mRNA | upstream | 150661 | 9922178 ~ 9928130 (-) | True | dhrs3a |
| XM_026920349.2 | mRNA | upstream | 157751 | 9929268 ~ 9942531 (-) | True | igsf21b |
| XM_034311733.1 | mRNA | upstream | 173334 | 9944851 ~ 9982274 (-) | True | arhgef10lb |
| XM_026920345.2 | mRNA | upstream | 173334 | 9944851 ~ 9976582 (-) | False | arhgef10lb |
| XR_003403155.2 | other | downstream | 1190453 | 8566656 ~ 8578600 (-) | False | ttll10 |
| TU296847 | other | downstream | 2259306 | 7476274 ~ 7509747 (-) | False | ctnnbip1 |
| TU296070 | other | downstream | 3461290 | 6304844 ~ 6307763 (-) | False | rps26 |
| XR_003404646.1 | other | downstream | 4620921 | 5148053 ~ 5148132 (-) | True | LOC113545697 |
| XR_003404648.2 | other | downstream | 4621234 | 5147735 ~ 5147819 (-) | True | LOC113545699 |
| TU298725 | other | upstream | 257975 | 10029492 ~ 10029993 (-) | True | G252373 |
| XR_003403171.2 | other | upstream | 689177 | 10460694 ~ 10469534 (-) | False | usp21 |
| TU299234 | other | upstream | 865006 | 10636523 ~ 10638718 (-) | False | sinup |
| TU299470 | other | upstream | 1242447 | 11013964 ~ 11015630 (-) | False | LOC113530950 |
| trnae-uuc_4 | other | upstream | 1487526 | 11259043 ~ 11259114 (-) | True | trnae-uuc_4 |
